RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 H0YGG7 62 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 SLC35G6P0C7Q6 338 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 IFNA8P32881 189 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 EMDP50402 254 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 ARF3P61204 181 aaPredicted RBP12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 FOXK2Q01167 660 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 C1orf61Q13536 156 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM53BQ14153 422 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 PRPF38BQ5VTL8 546 aaKnown RBP12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 FIGLAQ6QHK4 219 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 GPR135Q8IZ08 494 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 SAMD12Q8N8I0 201 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 COX18Q8N8Q8 333 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 OR5H6Q8NGV6 325 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNRF4Q8WWF5 429 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 C4orf36Q96KX1 117 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 TNFRSF13CQ96RJ3 184 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 GPR174Q9BXC1 333 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 NDEL1Q9GZM8 345 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 HDHD2Q9H0R4 259 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 PILRAQ9UKJ1 303 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 WDR87Q6ZQQ6 2873 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 A0A1W2PRG6 482 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 IRGMA1A4Y4 181 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 CDHR4A6H8M9 788 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 SGK494L7N484 410 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 TNFRSF10CO14798 259 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 RGS9O75916 674 aaPredicted RBP12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 SYPP08247 313 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 SMIM10L1P0DMW3 83 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 PAICSP22234 425 aaKnown RBP12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 S100A1P23297 94 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 MAGEB1P43366 347 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 RPS15AP62244 130 aaKnown RBP12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 GALK2Q01415 458 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 ZNF85Q03923 595 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 OR5W2Q8NH69 310 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 BPIFA2Q96DR5 249 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 TM4SF19Q96DZ7 209 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 SMIM10Q96HG1 83 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 CD180Q99467 661 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 TEAD3Q99594 435 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 ANKRD19PQ9H560 264 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 KLHL1Q9NR64 748 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 ENAMQ9NRM1 1142 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 SLC22A7Q9Y694 548 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 MAU2Q9Y6X3 613 aa12.46□□□□□ -0.42
GTF2F1-201ENST00000394456 CACNA1IQ9P0X4 2223 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 DUXAA6NLW8 204 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 CDC123O75794 336 aaPredicted RBP12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 HLA-DQB1P01920 261 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ZNF24P17028 368 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 GPR176Q14439 515 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ZNF619Q8N2I2 560 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 CADM2Q8N3J6 435 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 LRRC17Q8N6Y2 441 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 GALNT6Q8NCL4 622 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ABHD1Q96SE0 405 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ZNF559Q9BR84 538 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 PIGUQ9H490 435 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ACTR10Q9NZ32 417 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 MUC3AQ02505 3323 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 EEF1E1O43324 174 aaKnown RBP12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 B3GALT2O43825 422 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 IGKV1D-16P01601 117 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 YPEL5P62699 121 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 TP53I3Q53FA7 332 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 YIF1BQ5BJH7 314 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 CEACAM19Q7Z692 300 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 BRIX1Q8TDN6 353 aaKnown RBP12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 SLC22A18Q96BI1 424 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ZMYND19Q96E35 227 aaPredicted RBP12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 KCNJ15Q99712 375 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 TPSD1Q9BZJ3 242 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ASB6Q9NWX5 421 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 NTMQ9P121 344 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 CPNE7Q9UBL6 633 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 ZNF346Q9UL40 294 aaKnown RBP12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 C19orf53Q9UNZ5 99 aaPredicted RBP12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 SIGLEC7Q9Y286 467 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 DTX4Q9Y2E6 619 aa12.45□□□□□ -0.42
GTF2F1-201ENST00000394456 A0A0G2JK05 382 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 ERVH48-1M5A8F1 160 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 PSMD9O00233 223 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 TNFP01375 233 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 HMGN1P05114 100 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 NID1P14543 1247 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 MLLT3P42568 568 aaPredicted RBP12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 MGAT2Q10469 447 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 KIR2DS3Q14952 304 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 USP53Q70EK8 1073 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 DEFB119Q8N690 84 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 NT5CQ8TCD5 201 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 SLC37A2Q8TED4 501 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 HSD17B8Q92506 261 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 SERINC2Q96SA4 455 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 ADGRL4Q9HBW9 690 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 TRAV6A0A075B6T7 132 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms