RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 BLACEA4D250 179 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 SNTNA6NMZ2 147 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 TSPAN19P0C672 248 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 SLC16A1P53985 500 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 C22orf42Q6IC83 251 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 GHDCQ8N2G8 530 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 LNX2Q8N448 690 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 LSMEM1Q8N8F7 131 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 OR2I1PQ8NGU4 316 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 SLC2A12Q8TD20 617 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 SLC41A2Q96JW4 573 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 NDC1Q9BTX1 674 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 ZNF426Q9BUY5 554 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 NUDT9Q9BW91 350 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 TEX12Q9BXU0 123 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 TRIM2Q9C040 744 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 NXF2Q9GZY0 626 aaKnown RBP13.85□□□□□ -0.19
GPC3-202ENST00000394299 ISG20L2Q9H9L3 353 aaKnown RBP13.85□□□□□ -0.19
GPC3-202ENST00000394299 MCCC2Q9HCC0 563 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 ZNF304Q9HCX3 659 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 STUB1Q9UNE7 303 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 DDAH2O95865 285 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 MRPL3P09001 348 aaKnown RBP13.84□□□□□ -0.19
GPC3-202ENST00000394299 CPEP16870 476 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 HTR1FP30939 366 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 CTBP2P56545 445 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 NSDHLQ15738 373 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 TIMM50Q3ZCQ8 353 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 KLHL26Q53HC5 615 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 GUSBP11Q6P575 273 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 LINC00114Q6XXX2 140 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 SYT14Q8NB59 555 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 ZNF485Q8NCK3 441 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 ZNF721Q8TF20 911 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 ZNF501Q96CX3 271 aaPredicted RBP13.84□□□□□ -0.19
GPC3-202ENST00000394299 C1GALT1C1Q96EU7 318 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 DNAJA3Q96EY1 480 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 DACH2Q96NX9 599 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 ADOQ96SZ5 270 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 C14orf105Q9NVL8 296 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 CTSFQ9UBX1 484 aa13.84□□□□□ -0.19
GPC3-202ENST00000394299 CAB39Q9Y376 341 aaPredicted RBP13.84□□□□□ -0.19
GPC3-202ENST00000394299 TP53BP1Q12888 1972 aaPredicted RBP13.84□□□□□ -0.19
GPC3-202ENST00000394299 FER1L5A0AVI2 2057 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 IGKV3D-11A0A0A0MRZ8 115 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 IGHV3-20A0A0C4DH32 117 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 IMPA2O14732 288 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 RCBTB2O95199 551 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 ENDOUP21128 410 aaKnown RBP13.83□□□□□ -0.19
GPC3-202ENST00000394299 CCR4P51679 360 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 RGS21Q2M5E4 152 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 LANCL3Q6ZV70 420 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 TMEM99Q8N816 258 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 SLC38A9Q8NBW4 561 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 SLC37A3Q8NCC5 494 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 MAFAQ8NHW3 353 aaPredicted RBP13.83□□□□□ -0.19
GPC3-202ENST00000394299 PHOSPHO1Q8TCT1 267 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 SPRYD4Q8WW59 207 aaPredicted RBP13.83□□□□□ -0.19
GPC3-202ENST00000394299 RFKQ969G6 155 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 ARHGAP9Q9BRR9 750 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 MED17Q9NVC6 651 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 TXNL4BQ9NX01 149 aaKnown RBP13.83□□□□□ -0.19
GPC3-202ENST00000394299 RPS6KB2Q9UBS0 482 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 SEC14L4Q9UDX3 406 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 PRODH2Q9UF12 536 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 MKL2Q9ULH7 1088 aa13.83□□□□□ -0.19
GPC3-202ENST00000394299 SF3B6Q9Y3B4 125 aaKnown RBP13.83□□□□□ -0.19
GPC3-202ENST00000394299 ASCC3Q8N3C0 2202 aaKnown RBP13.83□□□□□ -0.2
GPC3-202ENST00000394299 TMEM129A0AVI4 362 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 FBLP22087 321 aaKnown RBP13.83□□□□□ -0.2
GPC3-202ENST00000394299 DNASE1L3Q13609 305 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 CRMP1Q14194 572 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 ARHGAP40Q5TG30 622 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 NIPAL3Q6P499 406 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 ULK3Q6PHR2 472 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 ZNF550Q7Z398 422 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 DEFB123Q8N688 67 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 RELTQ969Z4 430 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 NUAK2Q9H093 628 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 PALMDQ9NP74 551 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 ERVK13-1Q9NX77 482 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 TNFRSF10DQ9UBN6 386 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 SERTAD3Q9UJW9 196 aa13.83□□□□□ -0.2
GPC3-202ENST00000394299 EXOGQ9Y2C4 368 aaKnown RBP13.83□□□□□ -0.2
GPC3-202ENST00000394299 DVL2O14641 736 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 SOX30O94993 753 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 CDRT1O95170 752 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 IGKV3-11P04433 115 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 OCM2P0CE71 109 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 OCMP0CE72 109 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 ZNF12P17014 697 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 GTF2E2P29084 291 aaKnown RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 ARRB1P49407 418 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 RPS7P62081 194 aaKnown RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 MEPCEQ7L2J0 689 aaKnown RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 FAM83FQ8NEG4 500 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 OR51L1Q8NGJ5 315 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 OR5M3Q8NGP4 307 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 CHPT1Q8WUD6 406 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms