RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ME2P23368 584 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ELK4P28324 431 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 AQP1P29972 269 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 OPRM1P35372 400 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 EIF1P41567 113 aaKnown RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 KIR2DL2P43627 348 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 CPA2P48052 419 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 IDH2P48735 452 aaKnown RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 CRISP3P54108 245 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 EEFSECP57772 596 aaKnown RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 HOXC5Q00444 222 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 MERTKQ12866 999 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 KLF10Q13118 480 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 MYBPHQ13203 477 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 NFYCQ13952 458 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ESPNLQ6ZVH7 1005 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 PLEKHM3Q6ZWE6 761 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 BTLAQ7Z6A9 289 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 COMTD1Q86VU5 262 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 DMRTC2Q8IXT2 367 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZZZ3Q8IYH5 903 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 CLIP4Q8N3C7 705 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR52P1PQ8NH57 321 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF563Q8TA94 476 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 LINC01560Q8TB33 94 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ABHD3Q8WU67 409 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 C10orf82Q8WW14 230 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 STON2Q8WXE9 905 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 OSTF1Q92882 214 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 STARD4Q96DR4 205 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 MRGPRX4Q96LA9 322 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF317Q96PQ6 595 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR5B2Q96R09 309 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 SPOCK3Q9BQ16 436 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 SIKE1Q9BRV8 207 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 SFXN3Q9BWM7 321 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 PRRG4Q9BZD6 226 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR11A1Q9GZK7 315 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 RABEP2Q9H5N1 569 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 PIF1Q9H611 641 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 CCDC134Q9H6E4 229 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 MTHFD2LQ9H903 347 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 RNF122Q9H9V4 155 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 A4GALTQ9NPC4 353 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 SAR1AQ9NR31 198 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 CTPS2Q9NRF8 586 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ACER3Q9NUN7 267 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 GALNT8Q9NY28 637 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ARMCX1Q9P291 453 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 LEF1Q9UJU2 399 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF175Q9Y473 711 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 GPC6Q9Y625 555 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 FREM3P0C091 2139 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 PHF3Q92576 2039 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 LRBAP50851 2863 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CDHR4A6H8M9 788 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CFAP73A6NFT4 308 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 C5orf58C9J3I9 102 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ETV2O00321 342 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SYT5O00445 386 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ATP8B1O43520 1251 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 DNAJA2O60884 412 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 PGM3O95394 542 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SYNGR4O95473 234 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 PLGP00747 810 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ARAFP10398 606 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 BMP2P12643 396 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 NID1P14543 1247 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ENPP1P22413 925 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ADH6P28332 368 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SLC7A1P30825 629 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SEC24CP53992 1094 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CARD18P57730 90 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 EEF1A1P68104 462 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 TXNL4AP83876 142 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CDK6Q00534 326 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 TLE4Q04727 773 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 FADDQ13158 208 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SELENBP1Q13228 472 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ADRM1Q16186 407 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF239Q16600 458 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 GLIPR1L2Q4G1C9 344 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 LIN52Q52LA3 116 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 RUNDC3AQ59EK9 446 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SLC25A53Q5H9E4 307 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 AP1ARQ63HQ0 302 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 REP15Q6BDI9 236 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 GDF7Q7Z4P5 450 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SERPINA11Q86U17 422 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 SNX32Q86XE0 403 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 PEX5LQ8IYB4 626 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CADM2Q8N3J6 435 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 POU5F2Q8N7G0 328 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ST8SIA1Q92185 356 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 RNASE6Q93091 150 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF775Q96BV0 537 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 ARL5BQ96KC2 179 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CGREF1Q99674 301 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CCDC106Q9BWC9 280 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms