RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 APOOLQ6UXV4 268 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 IRF2BP2Q7Z5L9 587 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 TRUB1Q8WWH5 349 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 MED30Q96HR3 178 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 GFI1Q99684 422 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 RPP25Q9BUL9 199 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 KCNJ16Q9NPI9 418 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 EURLQ9NYK6 297 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SEC14L4Q9UDX3 406 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 POU2F3Q9UKI9 436 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 GSTK1Q9Y2Q3 226 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 AMDHD2Q9Y303 409 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 REREQ9P2R6 1566 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MYOM3Q5VTT5 1437 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 IQCF5A8MTL0 148 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SEC14L6B5MCN3 397 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PTGESO14684 152 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PRF1P14222 555 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 F8A1P23610 371 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 GIFP27352 417 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MAGEA11P43364 429 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 GHRHRQ02643 423 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 AARS2Q5JTZ9 985 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 ANKRD26P1Q6NSI1 321 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 CCNI2Q6ZMN8 369 aaPredicted RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 AHSA2Q719I0 299 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 LGI4Q8N135 537 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 OR4D9Q8NGE8 314 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 HTR3CQ8WXA8 447 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 ACBD6Q9BR61 282 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 UCK2Q9BZX2 261 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 ACTR6Q9GZN1 396 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MBNL3Q9NUK0 354 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 GID8Q9NWU2 228 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SERGEFQ9UGK8 458 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MGAT4AQ9UM21 535 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 FARSAQ9Y285 508 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 MAP3K15Q6ZN16 1313 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 A0A1B0GVG6 124 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 A0A1W2PPC1 479 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 C11orf98E9PRG8 122 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PLA2G1BP04054 148 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 CD1DP15813 335 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 HOXA7P31268 230 aaPredicted RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 SLC1A1P43005 524 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MAGEA2P43356 314 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 GPM6AP51674 278 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 AP3S2P59780 193 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PPP2CBP62714 309 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PPP2CAP67775 309 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SMARCB1Q12824 385 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 OTUD1Q5VV17 481 aaPredicted RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 PLPP4Q5VZY2 271 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 LINC00114Q6XXX2 140 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 DBX2Q6ZNG2 339 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PTF1AQ7RTS3 328 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 ASCL5Q7RTU5 278 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SMIM15Q7Z3B0 74 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 CLDN19Q8N6F1 224 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 OR1J1Q8NGS3 322 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 OR1F12Q8NHA8 337 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 LYPD6BQ8NI32 183 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 TMEM255BQ8WV15 326 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 ARNTL2Q8WYA1 636 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 TAAR8Q969N4 342 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 RILPQ96NA2 401 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SCAND2PQ9GZW5 306 aaPredicted RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 THUMPD1Q9NXG2 353 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 RCOR3Q9P2K3 495 aaPredicted RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 PHF11Q9UIL8 331 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 TMEM114B3SHH9 223 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 BUD23O43709 281 aaKnown RBP3.21□□□□□ -1.89
XRN1-202ENST00000392981 MGRN1O60291 552 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 CTRB1P17538 263 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 ACTA2P62736 377 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 ACTG2P63267 376 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 ACTC1P68032 377 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 ACTA1P68133 377 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 MRPS6P82932 125 aaKnown RBP3.21□□□□□ -1.89
XRN1-202ENST00000392981 C3AR1Q16581 482 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 LIPNQ5VXI9 398 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 CTRB2Q6GPI1 263 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 EMBQ6PCB8 327 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 ENPP6Q6UWR7 440 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 GRASPQ7Z6J2 395 aaPredicted RBP3.21□□□□□ -1.89
XRN1-202ENST00000392981 TRAPPC5Q8IUR0 188 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 CSNK1A1LQ8N752 337 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 C19orf18Q8NEA5 215 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 RFESDQ8TAC1 157 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 CACNG8Q8WXS5 425 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 ZFP3Q96NJ6 502 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 XPO6Q96QU8 1125 aaKnown RBP3.21□□□□□ -1.89
XRN1-202ENST00000392981 SLC38A3Q99624 504 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 NXF3Q9H4D5 531 aaKnown RBP3.21□□□□□ -1.89
XRN1-202ENST00000392981 GPR83Q9NYM4 423 aa3.21□□□□□ -1.89
XRN1-202ENST00000392981 SYNJ2O15056 1496 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 SHPRHQ149N8 1683 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 CIB4A0PJX0 185 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 MEX3AA1L020 520 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 H3BMQ9 156 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms