RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 MRAPQ8TCY5 172 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 IL1F10Q8WWZ1 152 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 ZNF75CPQ92670 426 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-205ENST00000391970 N4BP2L2Q92802 583 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-205ENST00000391970 SNF8Q96H20 258 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 TXN2Q99757 166 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 ERP44Q9BS26 406 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 PAXXQ9BUH6 204 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 SLC7A5P2Q9GIP4 190 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 TMEM117Q9H0C3 514 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 RABL2AQ9UBK7 228 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-205ENST00000391970 LCMT1Q9UIC8 334 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 TMCO1Q9UM00 188 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 SAMD4AQ9UPU9 718 aaKnown RBP2.34□□□□□ -2.03
PTPRC-205ENST00000391970 OR10H1Q9Y4A9 318 aa2.34□□□□□ -2.03
PTPRC-205ENST00000391970 GAKO14976 1311 aa2.34□□□□□ -2.04
PTPRC-205ENST00000391970 GCC2Q8IWJ2 1684 aa2.34□□□□□ -2.04
PTPRC-205ENST00000391970 SETD1AO15047 1707 aaKnown RBP2.34□□□□□ -2.04
PTPRC-205ENST00000391970 ATP7BP35670 1465 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 KDM5DQ9BY66 1539 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 UGGT2Q9NYU1 1516 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 ARHGEF12Q9NZN5 1544 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 CFAP74Q9C0B2 1584 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 TMEM131LA2VDJ0 1609 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 ERICH2A1L162 156 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 E9PLD3 99 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 K7ENP7 123 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 PHOX2AO14813 284 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF254O75437 659 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SCRG1O75711 98 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 RPA2P15927 270 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 PGCP20142 388 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 IFNAR2P48551 515 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SH3BGRP55822 239 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 B2MP61769 119 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 RIPPLY1Q0D2K3 151 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 ST3GAL3Q11203 375 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 LAGE3Q14657 143 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 NDUFA9Q16795 377 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SLC5A12Q1EHB4 618 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 GSG1Q2KHT4 349 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 TIGITQ495A1 244 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 MARC1Q5VT66 337 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 OLFML2AQ68BL7 652 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 FAHD2BQ6P2I3 314 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 VITQ6UXI7 678 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 C3orf62Q6ZUJ4 267 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 CENPQQ7L2Z9 268 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 APTXQ7Z2E3 356 aaKnown RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 CCDC65Q8IXS2 484 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 C10orf67Q8IYJ2 551 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SLC7A5P1Q8MH63 180 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 GPD1LQ8N335 351 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 CLDN19Q8N6F1 224 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 C15orf54Q8N8G6 183 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 DENND6BQ8NEG7 585 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 TRUB1Q8WWH5 349 aaKnown RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 FAM3CQ92520 227 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 PSMG2Q969U7 264 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 FAHD2AQ96GK7 314 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 VSIG2Q96IQ7 327 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SLC6A7Q99884 636 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 TSSK1BQ9BXA7 367 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 POLR1EQ9GZS1 481 aaKnown RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 ELOVL3Q9HB03 270 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SLC7A10Q9NS82 523 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 FKBP14Q9NWM8 211 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 WRAP73Q9P2S5 460 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SPRR3Q9UBC9 169 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 GNG12Q9UBI6 72 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 ABCD2Q9UBJ2 740 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 Q9UF83 564 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 GGA2Q9UJY4 613 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 SNX6Q9UNH7 406 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 OARD1Q9Y530 152 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 MAPK8IP3Q9UPT6 1336 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 NUP160Q12769 1436 aa2.33□□□□□ -2.04
PTPRC-205ENST00000391970 COL2A1P02458 1487 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-205ENST00000391970 HMGXB3Q12766 1538 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 EFCAB6Q5THR3 1501 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 SMARCA4P51532 1647 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 IQANK1A0A1B0GTG1 560 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 A0A1W2PNV4 684 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 MBLAC1A4D2B0 266 aaPredicted RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 ERICH4A6NGS2 130 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 GOLGA6L10A6NI86 522 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 H0YC42 278 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 H0YCG3 227 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 GOLGA6L19H0YKK7 550 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 K7EQM0 130 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CASQ2O14958 399 aaPredicted RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 MAGEB3O15480 346 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 RNF113AO15541 343 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 GMFGO60234 142 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 SHOX2O60902 331 aaPredicted RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CABYRO75952 493 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 YEATS4O95619 227 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms