RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 CFAP221Q4G0U5 840 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 FILIP1LQ4L180 1135 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 TOR1AIP1Q5JTV8 583 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ARSKQ6UWY0 536 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 UNQ9370/PRO34162Q6UXP9 181 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ZYG11AQ6WRX3 759 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ABHD12BQ7Z5M8 362 aaPredicted RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 SAXO1Q8IYX7 474 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 PDCL2Q8N4E4 241 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 HDDC3Q8N4P3 179 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 C10orf53Q8N6V4 93 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 GMCL1P1Q8NEA9 526 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ANKRD20A12PQ8NF67 263 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 OR52K1Q8NGK4 314 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF596Q8TC21 504 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 SLC5A11Q8WWX8 675 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ATP6V0A1Q93050 837 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 SLC25A36Q96CQ1 311 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 TUBGCP3Q96CW5 907 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 C8orf76Q96K31 380 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 TBC1D10AQ9BXI6 508 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ERVK-6Q9BXR3 956 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 TEX13AQ9BXU3 409 aaPredicted RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 NACA2Q9H009 215 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 GLRX2Q9NS18 164 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 HOMER3Q9NSC5 361 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 NMRK1Q9NWW6 199 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 PIN4Q9Y237 131 aaKnown RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 CHTOPQ9Y3Y2 248 aaKnown RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 SPAG9O60271 1321 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 TTC21BQ7Z4L5 1316 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 IGKV1D-17A0A075B6S4 117 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 IGHV3-64DA0A0J9YX35 117 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 RNF103-CHMP3A0A140T963 221 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 NKX2-6A6NCS4 301 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 GJE1A6NN92 205 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 SERPINE3A8MV23 424 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 L7N2F9 121 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 CASKO14936 926 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 MAGEB3O15480 346 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 PEX11AO75192 247 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 BCAS2O75934 225 aaPredicted RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 ADCY5O95622 1261 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 PNPP00491 289 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 IFNB1P01574 187 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 ASGR1P07306 291 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 RHOXF2BP0C7M4 288 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 GDI1P31150 447 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 RDXP35241 583 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 RFC4P35249 363 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 NOVA1P51513 510 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 SRP54P61011 504 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 SSTP61278 116 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 RPA4Q13156 261 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 CBX3Q13185 183 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 TFDP1Q14186 410 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 SYCP1Q15431 976 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 NSDHLQ15738 373 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 IMMTQ16891 758 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 C12orf60Q5U649 245 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 AADACL4Q5VUY2 407 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 AP1ARQ63HQ0 302 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 IGFL1Q6UW32 110 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 ACP7Q6ZNF0 438 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 DNM1P46Q6ZS02 220 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 TOM1L2Q6ZVM7 507 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 AKNAQ7Z591 1439 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 MTERF4Q7Z6M4 381 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 CDH26Q8IXH8 852 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 MTURNQ8N3F0 131 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 LINC00469Q8N7U9 141 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 MRPL43Q8N983 215 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 OR56B2PQ8NGI1 322 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 OR51G1Q8NGK1 321 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 DEDD2Q8WXF8 326 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 NRBF2Q96F24 287 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 TCEANC2Q96MN5 208 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF560Q96MR9 790 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 RHOXF2Q9BQY4 288 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 TBCDQ9BTW9 1192 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 CAPS2Q9BXY5 557 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 KRT23Q9C075 422 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 STMN4Q9H169 189 aaPredicted RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 HSD3B7Q9H2F3 369 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 GPN2Q9H9Y4 310 aaPredicted RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 ANO10Q9NW15 660 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 AATFQ9NY61 560 aaKnown RBP eCLIP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 NINJ2Q9NZG7 142 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 HMG20BQ9P0W2 317 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 FETUBQ9UGM5 382 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 IL19Q9UHD0 177 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 HOOK1Q9UJC3 728 aaKnown RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 AURKCQ9UQB9 309 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 ASB3Q9Y575 518 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 TEX264Q9Y6I9 313 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 V9GYY5 206 aaPredicted RBP1.7□□□□□ -2.14
TRAV40-201ENST00000390467 KDRP35968 1356 aa1.7□□□□□ -2.14
TRAV40-201ENST00000390467 MROH5Q6ZUA9 1318 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms