RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 EIF1P41567 113 aaKnown RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 SUCLG1P53597 346 aaKnown RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 SEC24CP53992 1094 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 CRISP3P54108 245 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 TPD52P55327 224 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 EEFSECP57772 596 aaKnown RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 RPS3AP61247 264 aaKnown RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 GNGT1P63211 74 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 KCNJ10P78508 379 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 PLAURQ03405 335 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 KLF10Q13118 480 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 FADDQ13158 208 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 SKP2Q13309 424 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 CBFBQ13951 182 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 GNA13Q14344 377 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 QPRTQ15274 297 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 MAPRE2Q15555 327 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 MAPK11Q15759 364 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 TOMM34Q15785 309 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 HSPB2Q16082 182 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 GCNT6Q5T4J0 391 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 PPP4R4Q6NUP7 873 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 PLXDC2Q6UX71 529 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 SPATA21Q7Z572 469 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 SYT9Q86SS6 491 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 GRAMD2AQ8IUY3 354 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 GTPBP8Q8N3Z3 284 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 C9orf106Q8NAJ2 232 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 ATP6V1C2Q8NEY4 427 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 TNIP2Q8NFZ5 429 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 OR52P1PQ8NH57 321 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 FBXO27Q8NI29 283 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF563Q8TA94 476 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 POC1BQ8TC44 478 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 GPR119Q8TDV5 335 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 TSPEARQ8WU66 669 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 SLC38A5Q8WUX1 472 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 C10orf82Q8WW14 230 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 OIT3Q8WWZ8 545 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 MAL2Q969L2 176 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 CPPED1Q9BRF8 314 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 TRIM8Q9BZR9 551 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 UCK2Q9BZX2 261 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 IKZF5Q9H5V7 419 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 TMEM185BQ9H7F4 350 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 MTHFD2LQ9H903 347 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-202ENST00000380747 CALHM2Q9HA72 323 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 MRGBPQ9NV56 204 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 CORO2BQ9UQ03 480 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 SLC35A3Q9Y2D2 325 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 AP4B1Q9Y6B7 739 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 MYO7BQ6PIF6 2116 aa8.32□□□□□ -1.08
HMGN1-202ENST00000380747 TRBV5-3A0A0A0MS03 114 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 A0A0G2JPF8 293 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 LOC100653049A0A140TA62 436 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 C7orf72A4D263 438 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 MBD3L4A6NDZ8 208 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 MBD3L3A6NE82 208 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 MBD3L5A6NJ08 208 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 HNRNPCL2B2RXH8 293 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 HNRNPCL3B7ZW38 293 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 HNRNPCL1O60812 293 aaKnown RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 BCAS1O75363 584 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 KRT34O76011 436 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 HNRNPCL4P0DMR1 293 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 TMIGD3P0DMS9 266 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 COX6B1P14854 86 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 PRKCAP17252 672 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 PGCP20142 388 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 IL11P20809 199 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 SSTR2P30874 369 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 CEACAM8P31997 349 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 AGFG1P52594 562 aaKnown RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 CLDN15P56746 228 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 CAPRIN1Q14444 709 aaKnown RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 SGCBQ16585 318 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 MMEL1Q495T6 779 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 RUNDC3AQ59EK9 446 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 AP1ARQ63HQ0 302 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 POMZP3Q6PJE2 187 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 DLEU7Q6UYE1 221 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 SNX32Q86XE0 403 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 VRK2Q86Y07 508 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 LIX1LQ8IVB5 337 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 CMIPQ8IY22 773 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 LILRA2Q8N149 483 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 C10orf111Q8N326 155 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 NAXEQ8NCW5 288 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 LILRB4Q8NHJ6 448 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 MBD3L2Q8NHZ7 208 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 NFKBIDQ8NI38 313 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 CNOT9Q92600 299 aaKnown RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 PMM1Q92871 262 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 TM9SF2Q99805 663 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 TREX2Q9BQ50 279 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 PINK1Q9BXM7 581 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 NSRP1Q9H0G5 558 aaKnown RBP8.31□□□□□ -1.08
HMGN1-202ENST00000380747 A4GALTQ9NPC4 353 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 KCNJ16Q9NPI9 418 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 ARMCX1Q9P291 453 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms