RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CILP2Q8IUL8 1156 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 CBARPQ8N350 705 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 FBXO39Q8N4B4 442 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 ZFP41Q8N8Y5 198 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 OR4C15Q8NGM1 316 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 OR2G2Q8NGZ5 317 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 NEIL3Q8TAT5 605 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF385AQ96PM9 386 aaKnown RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 OR52E6Q96RD3 313 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 CCNL2Q96S94 520 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 SEPT5Q99719 369 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 C1QTNF3Q9BXJ4 246 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 PINK1Q9BXM7 581 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 ZDHHC5Q9C0B5 715 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 LAT2Q9GZY6 243 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 OR10A4Q9H209 315 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM231Q9H6L2 316 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 SERHLQ9NQF3 203 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 STOX2Q9P2F5 926 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 ZDHHC8Q9ULC8 765 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 HTTP42858 3142 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 PCNTO95613 3336 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 TRDV1A0A1B0GX56 115 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 A0A1W2PRB8 838 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 A6NLC8 198 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 INSIG1O15503 277 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 PRKYO43930 277 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 FADS1O60427 444 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 KLHL18O94889 574 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 RHOCP08134 193 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 CLTBP09497 229 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 CCL5P13501 91 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 RPA2P15927 270 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 HMGA1P17096 107 aaKnown RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 S100A2P29034 98 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 MAPK9P45984 424 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 CDX1P47902 265 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 H2BFSP57053 126 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 ITKQ08881 620 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 ARHGEF7Q14155 803 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 RBBP7Q16576 425 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 TTLL9Q3SXZ7 439 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 FNDC3BQ53EP0 1204 aaKnown RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 LRIF1Q5T3J3 769 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 IDNKQ5T6J7 187 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 SFRP4Q6FHJ7 346 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 GLDNQ6ZMI3 551 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 LRRTM1Q86UE6 522 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 MARCH9Q86YJ5 346 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 FAM46DQ8NEK8 389 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 OR51Q1Q8NH59 317 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 THAP4Q8WY91 577 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 GTPBP3Q969Y2 492 aaKnown RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 FUZQ9BT04 418 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM208Q9BTX3 173 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 IFT27Q9BW83 186 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 TSSK6Q9BXA6 273 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 MRPL17Q9NRX2 175 aaKnown RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 PARPBPQ9NWS1 579 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 GALPQ9UBC7 116 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 PCTPQ9UKL6 214 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 FZD4Q9ULV1 537 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM184BQ9Y519 407 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-201ENST00000379989 YIPF1Q9Y548 306 aa6.96□□□□□ -1.3
CDKL5-201ENST00000379989 MMP2P08253 660 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ACKR3P25106 362 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CHI3L1P36222 383 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 FEN1P39748 380 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CRYBA2P53672 197 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 TIAL1Q01085 375 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SNTB2Q13425 540 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 GFOD2Q3B7J2 385 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 PLEKHN1Q494U1 663 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 DOK6Q6PKX4 331 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 IL27RAQ6UWB1 636 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM200AQ86VY9 491 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 TPRA1Q86W33 373 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 PTOV1Q86YD1 416 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CDK20Q8IZL9 346 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ARIH2OSQ8N7S6 290 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SAMD12Q8N8I0 201 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ESAMQ96AP7 390 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ARHGAP9Q9BRR9 750 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 PTGES2Q9H7Z7 377 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 NT5MQ9NPB1 228 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 C1GALT1Q9NS00 363 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 GAR1Q9NY12 217 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 MRPS18CQ9Y3D5 142 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF106Q9H2Y7 1883 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 C2orf92A0A1B0GVN3 265 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 H3BNC9 293 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 DVL2O14641 736 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ARPC1BO15143 372 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 B4GALT3O60512 393 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 VNN2O95498 520 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 TIMP1P01033 207 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 LINC00614P0C842 121 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SLC2A1P11166 492 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 XPAP23025 273 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CPT2P23786 658 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms