RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TM4SF5O14894 197 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 POLR1CO15160 346 aaPredicted RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 AKAP8O43823 692 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 PTP4A3O75365 173 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 PPM1BO75688 479 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CDC123O75794 336 aaPredicted RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 OR2B3O76000 313 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 NTN1O95631 604 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CH25HO95992 272 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 IL1AP01583 271 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 IGKV1D-16P01601 117 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 ZGLP1P0C6A0 271 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 LIMS3P0CW19 117 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 LIMS4P0CW20 117 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CT45A8P0DMV1 189 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CT45A9P0DMV2 189 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 GAAP10253 952 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 GLB1P16278 677 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 MAOAP21397 527 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 TBXA2RP21731 343 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 PAICSP22234 425 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 ADH7P40394 386 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CXCL12P48061 93 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 RFX3P48380 749 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SLC9A3P48764 834 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CSNK1EP49674 416 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 RPS3AP61247 264 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 OXA1LQ15070 435 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SF3A2Q15428 464 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CSRP2Q16527 193 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 CT45A2Q5DJT8 189 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 ALG10BQ5I7T1 473 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 PAQR6Q6TCH4 344 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 HSDL2Q6YN16 418 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 D2HGDHQ8N465 521 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 BCORP1Q8N888 145 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF527Q8NB42 609 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 DNAJA4Q8WW22 397 aaPredicted RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 ART5Q96L15 291 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SLC46A1Q96NT5 459 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 MED18Q9BUE0 208 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 HINT3Q9NQE9 182 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 LANCL2Q9NS86 450 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 FLRT3Q9NZU0 649 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 TNFRSF10DQ9UBN6 386 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 DAPK2Q9UIK4 370 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SIGLEC7Q9Y286 467 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SPIN1Q9Y657 262 aaPredicted RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 RALGAPA1Q6GYQ0 2036 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SLC22A31A6NKX4 558 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 RIIAD1A6NNX1 92 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 C17orf105B2RV13 164 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 LOC110117498-PIK3R3F6TDL0 507 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 H3BMH7 237 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 SDC3O75056 442 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 CSTAP01040 98 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 IGF2P01344 180 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 IFNGP01579 166 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 CLPSP04118 112 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 SAGP10523 405 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 GALP22466 123 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC6A6P31641 620 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 GABRA5P31644 462 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 PPICP45877 212 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 RORCP51449 518 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 PGDP52209 483 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 FXYD6P3P58550 94 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 DCAF7P61962 342 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 RUNX1T1Q06455 604 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 ATP1A4Q13733 1029 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 DOC2BQ14184 412 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 ERV3-1Q14264 604 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 SOWAHCQ53LP3 525 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 LIPKQ5VXJ0 399 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 NIPAL3Q6P499 406 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 ARHGAP11AQ6P4F7 1023 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 TMPRSS11AQ6ZMR5 421 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 RTL4Q6ZR62 310 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 MEPCEQ7L2J0 689 aaKnown RBP9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 C11orf74Q86VG3 221 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 CPOQ8IVL8 374 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 GPR135Q8IZ08 494 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF485Q8NCK3 441 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 OR4N2Q8NGD1 307 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 GRHL3Q8TE85 626 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC41A2Q96JW4 573 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 PTCHD1Q96NR3 888 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 IFT27Q9BW83 186 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC19A3Q9BZV2 496 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 RNF167Q9H6Y7 350 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 MKKSQ9NPJ1 570 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 ATP13A2Q9NQ11 1180 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 EXOSC3Q9NQT5 275 aaKnown RBP9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 C20orf141Q9NUB4 165 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 UCKL1Q9NWZ5 548 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 ZMIZ1Q9ULJ6 1067 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 ICAM5Q9UMF0 924 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 DTX4Q9Y2E6 619 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 CARD8Q9Y2G2 431 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms