RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 THSD7BQ9C0I4 1608 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 TRAV6A0A075B6T7 132 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 PTGESO14684 152 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 EIF3GO75821 320 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 UBL3O95164 117 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC25A27O95847 323 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 ONECUT2O95948 504 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 EGFP01133 1207 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 IGLV3-27P01718 113 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 LAMP1P11279 417 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 IDSP22304 550 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 CD79BP40259 229 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 BCL6P41182 706 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 OR1E2P47887 323 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 SRP9P49458 86 aaKnown RBP6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 RGS4P49798 205 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 RAP2BP61225 183 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 ECH1Q13011 328 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 NFATC2Q13469 925 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 PDE7AQ13946 482 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 OR2G6Q5TZ20 316 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 GLDNQ6ZMI3 551 aaPredicted RBP6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 PGAP1Q75T13 922 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 TMPRSS9Q7Z410 1059 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 APOBEC3FQ8IUX4 373 aaKnown RBP6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 SIAH3Q8IW03 269 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 ARMC10Q8N2F6 343 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 OR14C36Q8NHC7 312 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 NEIL3Q8TAT5 605 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 LPPQ93052 612 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 TMEM203Q969S6 136 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 TSSK3Q96PN8 268 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 OR51M1Q9H341 326 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC32A1Q9H598 525 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 TDP1Q9NUW8 608 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 CLDND1Q9NY35 253 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 NLGN3Q9NZ94 848 aa6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 CARHSP1Q9Y2V2 147 aaKnown RBP6.2□□□□□ -1.42
CDKAL1-202ENST00000378610 LOC105369274A0A096LPK9 316 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SNRPGP15A8MWD9 76 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 NUPL2O15504 423 aaKnown RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 ATG12O94817 140 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 ABHD16AO95870 558 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 IL5P05113 134 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 LGALS2P05162 132 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 RPLP2P05387 115 aaKnown RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 RB1P06400 928 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 IGFBP1P08833 259 aaPredicted RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 TIMP2P16035 220 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 MALP21145 153 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 IGFBP6P24592 240 aaPredicted RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 GIFP27352 417 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 BSGP35613 385 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SPAM1P38567 509 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 GDF5P43026 501 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SIM1P81133 766 aaPredicted RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 CXCL9Q07325 125 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 ZNF630Q2M218 657 aaPredicted RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SFRP5Q5T4F7 317 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 OLFML2AQ68BL7 652 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 ZNF626Q68DY1 528 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 BAIAP2L2Q6UXY1 529 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 BCDIN3DQ7Z5W3 292 aaKnown RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 PLEKHH3Q7Z736 793 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 NPAS3Q8IXF0 933 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 GPR65Q8IYL9 337 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 OR4N4Q8N0Y3 316 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 MEIOBQ8N635 442 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 C7orf57Q8NEG2 295 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 OR52M1Q8NGK5 317 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SPPL2AQ8TCT8 520 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SFT2D1Q8WV19 159 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 MRPL48Q96GC5 212 aaKnown RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 INTS14Q96SY0 518 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 COPS8Q99627 209 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 PTDSS2Q9BVG9 487 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAIM2Q9BWQ8 316 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 GOLGA2P5Q9HBQ8 144 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 CA10Q9NS85 328 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 DNAJB12Q9NXW2 375 aaKnown RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 RASL12Q9NYN1 266 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A18PA6NE21 464 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A16PA6NEW6 464 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A20PA6NIJ5 464 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A9PA6NNJ1 464 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 EFCAB7A8K855 629 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A5PA8MXJ8 464 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 ST8SIA5O15466 376 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SPINT1O43278 529 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FZD7O75084 574 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SERPIND1P05546 499 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A15PP0C7V4 464 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A14PP0C7W9 464 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 POU2F1P14859 743 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 RPA2P15927 270 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC1A3P43003 542 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 XKP51811 444 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 SEC61A1P61619 476 aaKnown RBP6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 TSPAN5P62079 268 aa6.19□□□□□ -1.42
CDKAL1-202ENST00000378610 ARF5P84085 180 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms