RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 SIDT2Q8NBJ9 832 aaKnown RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 ZNF485Q8NCK3 441 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 FAM131CQ96AQ9 280 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 MVB12BQ9H7P6 319 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 A6NJY4 79 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 FAM159BA6NKW6 160 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 A8MT66 165 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 FAM227AF5H4B4 570 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 H7BY64 318 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ENTPD3O75355 529 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SGSHP51688 502 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 HMGCS2P54868 508 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TMEM115Q12893 351 aaPredicted RBP8.24□□□□□ -1.09
LIG3-202ENST00000378526 P2RY14Q15391 338 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DHRS4L2Q6PKH6 230 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 BTNL3Q6UXE8 466 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DGAT2L6Q6ZPD8 337 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MON1AQ86VX9 555 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ZNF34Q8IZ26 560 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 POM121Q96HA1 1249 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SLC2A13Q96QE2 648 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 PLA2G12BQ9BX93 195 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 POPDC3Q9HBV1 291 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ASAH2Q9NR71 780 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SLC6A14Q9UN76 642 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TRAPPC1Q9Y5R8 145 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TMEM221A6NGB7 291 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SLC15A5A6NIM6 579 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RNASEK-C17orf49H0YIS7 233 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SIGLEC6O43699 453 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SPATA31C1P0DKV0 1188 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 G6PDP11413 515 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RARRES1P49788 294 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 PCLAFQ15004 111 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ZBTB37Q5TC79 503 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SPATC1Q76KD6 591 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 EIF4E3Q8N5X7 224 aaKnown RBP8.24□□□□□ -1.09
LIG3-202ENST00000378526 OR9K2Q8NGE7 335 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 HHIPL1Q96JK4 782 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MED9Q9NWA0 146 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DOK5Q9P104 306 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 OR1A1Q9P1Q5 309 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 B4GALT6Q9UBX8 382 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TMX2Q9Y320 296 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SLC22A7Q9Y694 548 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MAGI2Q86UL8 1455 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SCN2AQ99250 2005 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ANKRD31Q8N7Z5 1873 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ZNF320A2RRD8 509 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 FBP1P09467 338 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TMEM225BP0DP42 221 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SLC25A6P12236 298 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 KCNE1P15382 129 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 LTKP29376 864 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 CSN1S1P47710 185 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RPS18P62269 152 aaKnown RBP8.24□□□□□ -1.09
LIG3-202ENST00000378526 IRF9Q00978 393 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 AKR1C1Q04828 323 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 OR5I1Q13606 314 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SLC36A2Q495M3 483 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RNLSQ5VYX0 342 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 NCR3LG1Q68D85 454 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TMEM225Q6GV28 225 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 OR5A2Q8NGI9 324 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 OR5AR1Q8NGP9 310 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 LYSMD1Q96S90 227 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TXLNGYQ9BZA5 131 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ACSS1Q9NUB1 689 aaPredicted RBP8.24□□□□□ -1.09
LIG3-202ENST00000378526 KLRF1Q9NZS2 232 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RASD1Q9Y272 281 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 NUMBLQ9Y6R0 609 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ORM1P02763 201 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 CLLU1Q5K131 121 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 HES3Q5TGS1 186 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ZNF680Q8NEM1 530 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ZNF382Q96SR6 550 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TMEM175Q9BSA9 504 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MFSD1Q9H3U5 465 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RHOFQ9HBH0 211 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.24□□□□□ -1.09
LIG3-202ENST00000378526 ZDHHC18Q9NUE0 388 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 FBXO34Q9NWN3 711 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 PLEK2Q9NYT0 353 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 KLHL42Q9P2K6 505 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MRC2Q9UBG0 1479 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 FRMPD1Q5SYB0 1578 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 LRRC7Q96NW7 1537 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DLG5Q8TDM6 1919 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DRGXA6NNA5 263 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DEGS1O15121 323 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 PMCHP20382 165 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 LTBQ06643 244 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 CDC20Q12834 499 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MICAQ29983 383 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 METTL7BQ6UX53 244 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ZNF534Q76KX8 674 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 C12orf29Q8N999 325 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 OR9A2Q8NGT5 310 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 PHOSPHO1Q8TCT1 267 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms