RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SNUPNO95149 360 aaKnown RBP17.05■□□□□ 0.32
CBWD3-204ENST00000377349 OR12D1P0DN82 309 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 SLC7A1P30825 629 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 S100A3P33764 101 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 CLNS1AP54105 237 aaKnown RBP17.05■□□□□ 0.32
CBWD3-204ENST00000377349 C21orf58P58505 322 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 HPCAP84074 193 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 TMEM176BQ3YBM2 270 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-204ENST00000377349 NXNQ6DKJ4 435 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 BEND4Q6ZU67 534 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 WFDC8Q8IUA0 241 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 KIRREL3Q8IZU9 778 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 TOR1AIP2Q8NFQ8 470 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 RAB3IL1Q8TBN0 382 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 SDF2Q99470 211 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 TIGARQ9NQ88 270 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 CENPVL1A0A0U1RR11 272 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 E9PBE3 544 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 ZNF195O14628 629 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 FCMRO60667 390 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 TMCC2O75069 709 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 STX11O75558 287 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 GCM2O75603 506 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 UBTFL6P0CB48 400 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 CBFBQ13951 182 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 QPRTQ15274 297 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 OR8J2Q8NGG1 315 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 RNF128Q8TEB7 428 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 SLC35A5Q9BS91 424 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 MEAF6Q9HAF1 191 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 NKIRAS1Q9NYS0 192 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 ICAM5Q9UMF0 924 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 GPR52Q9Y2T5 361 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 GPC6Q9Y625 555 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 IGHV3-15A0A0B4J1V0 119 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 PRSS51A0A1B0GVH4 220 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 SERINC4A6NH21 518 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 GJE1A6NN92 205 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 ERLIN1O75477 346 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 CSTAP01040 98 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 TUBBP07437 444 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 PRKCAP17252 672 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 UQCRC2P22695 453 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 ELK4P28324 431 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 EPHA3P29320 983 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 KHKP50053 298 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 SUMO3P55854 103 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 MAGOHP61326 146 aaKnown RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 UFM1P61960 85 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 TNK1Q13470 666 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 ZNF239Q16600 458 aaKnown RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 GPAT3Q53EU6 434 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 SEZ6L2Q6UXD5 910 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 STK32CQ86UX6 486 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 GABRG1Q8N1C3 465 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 GPR119Q8TDV5 335 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 ABHD3Q8WU67 409 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 AKAP1Q92667 903 aaKnown RBP eCLIP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 S100PBPQ96BU1 408 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 THUMPD3Q9BV44 507 aaKnown RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 SRXN1Q9BYN0 137 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 CXorf56Q9H5V9 222 aa17.04■□□□□ 0.32
CBWD3-204ENST00000377349 WDR55Q9H6Y2 383 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-204ENST00000377349 A0A1W2PNR3 127 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 OVOL3O00110 214 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 NTN1O95631 604 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 AK1P00568 194 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ALDOCP09972 364 aaKnown RBP17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ATP5J2P56134 94 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 WDR4P57081 412 aaKnown RBP17.03■□□□□ 0.32
CBWD3-204ENST00000377349 PHC1P78364 1004 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 PPP2R2BQ00005 443 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 TSC22D1Q15714 1073 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ARHGAP11BQ3KRB8 267 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 TNFAIP8L3Q5GJ75 292 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 TMEM201Q5SNT2 666 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ADAM5Q6NVV9 412 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 TFAP2EQ6VUC0 442 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 NUFIP2Q7Z417 695 aaKnown RBP17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ATG4DQ86TL0 474 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-204ENST00000377349 OR5W2Q8NH69 310 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 PNPT1Q8TCS8 783 aaKnown RBP17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ZFP90Q8TF47 636 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 TESCQ96BS2 214 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ZNF524Q96C55 264 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 DNAJA3Q96EY1 480 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 ZBTB18Q99592 522 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 QRSL1Q9H0R6 528 aaKnown RBP17.03■□□□□ 0.32
CBWD3-204ENST00000377349 WDR45Q9Y484 360 aa17.03■□□□□ 0.32
CBWD3-204ENST00000377349 NPIPB9F8W1W9 429 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 SDHDO14521 159 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 EIF4E2O60573 245 aaKnown RBP17.02■□□□□ 0.31
CBWD3-204ENST00000377349 DANCRP0C864 163 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 RYKP34925 604 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 SELENBP1Q13228 472 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 DPY19L1Q2PZI1 675 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 TIGD2Q4W5G0 525 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 GTF2IRD2BQ6EKJ0 949 aa17.02■□□□□ 0.31
CBWD3-204ENST00000377349 DNAJC14Q6Y2X3 702 aaPredicted RBP17.02■□□□□ 0.31
CBWD3-204ENST00000377349 GTF2IRD2Q86UP8 949 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms