RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CHD7Q9P2D1 2997 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 SMIM30A4D0T7 59 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 GATBO75879 557 aaKnown RBP14.44□□□□□ -0.1
FXN-201ENST00000377270 IFNA10P01566 189 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 SRPRAP08240 638 aaKnown RBP14.44□□□□□ -0.1
FXN-201ENST00000377270 IMPA1P29218 277 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 METAP1P53582 386 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 WNT3P56703 355 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 PPP3R1P63098 170 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 GRHL2Q6ISB3 625 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 CLECL1Q8IZS7 167 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 OR5T3Q8NGG3 340 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 COL26A1Q96A83 441 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 FAM83CQ9BQN1 747 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 OCSTAMPQ9BR26 566 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 TOLLIPQ9H0E2 274 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 SLC6A20Q9NP91 592 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 GRHPRQ9UBQ7 328 aa14.44□□□□□ -0.1
FXN-201ENST00000377270 PLXNA2O75051 1894 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 MAGEB17A8MXT2 336 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 H0YIV9 168 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 SGK494L7N484 410 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 CASC3O15234 703 aaKnown RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 PPIHO43447 177 aaKnown RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 RP2O75695 350 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 ETHE1O95571 254 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 C6orf47O95873 294 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 ADH5P11766 374 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 RNH1P13489 461 aaKnown RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 PAX6P26367 422 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 ANXA11P50995 505 aaKnown RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 ZP1P60852 638 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 B3GNTL1Q67FW5 361 aaPredicted RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 SPRED2Q7Z698 418 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 OR5M9Q8NGP3 310 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 OR4Q3Q8NH05 313 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 DPH2Q9BQC3 489 aaPredicted RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 POLR2J2Q9GZM3 115 aaKnown RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 SEMA3GQ9NS98 782 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 MRPS23Q9Y3D9 190 aaKnown RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 NPC1O15118 1278 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 YY2O15391 372 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 SUV39H1O43463 412 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 SSNA1O43805 119 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 SCN2BO60939 215 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 LAMP1P11279 417 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 MESP2Q0VG99 397 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 TSTA3Q13630 321 aaPredicted RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 PTGES3Q15185 160 aaKnown RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 ARHGAP40Q5TG30 622 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 C22orf42Q6IC83 251 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 METAP1DQ6UB28 335 aaPredicted RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 SPNS3Q6ZMD2 512 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 LGI4Q8N135 537 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 ZNF561Q8N587 486 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 OR52J3Q8NH60 311 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 HUS1BQ8NHY5 278 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 PIGQQ9BRB3 760 aa14.43□□□□□ -0.1
FXN-201ENST00000377270 PARD6GQ9BYG4 376 aaPredicted RBP14.43□□□□□ -0.1
FXN-201ENST00000377270 OR8G3PP0DMU2 310 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 GPX2P18283 190 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 CSF2RBP32927 897 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 EPHA4P54764 986 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 ADPRHP54922 357 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 NHLH2Q02577 135 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 FOXO1Q12778 655 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 TMEM35AQ53FP2 167 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 LIN54Q6MZP7 749 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 LRRN1Q6UXK5 716 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 TSEN54Q7Z6J9 526 aaKnown RBP14.42□□□□□ -0.1
FXN-201ENST00000377270 PDZD3Q86UT5 571 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 CFAP206Q8IYR0 622 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 ZNF321PQ8N8H1 164 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 ZSCAN1Q8NBB4 408 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 RELL2Q8NC24 303 aaPredicted RBP14.42□□□□□ -0.1
FXN-201ENST00000377270 OR8J2Q8NGG1 315 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 OR56A3Q8NH54 315 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 IFI44Q8TCB0 444 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 LHX9Q9NQ69 397 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 DZANK1Q9NVP4 752 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 GOLT1BQ9Y3E0 138 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 CCDC163A0A0D9SF12 145 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 PLSCR5A0PG75 271 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 ANXA4P09525 319 aaPredicted RBP14.42□□□□□ -0.1
FXN-201ENST00000377270 HNRNPA1P09651 372 aaKnown RBP eCLIP14.42□□□□□ -0.1
FXN-201ENST00000377270 ZNF25P17030 456 aaPredicted RBP14.42□□□□□ -0.1
FXN-201ENST00000377270 GALNSP34059 522 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 MLLT11Q13015 90 aaPredicted RBP14.42□□□□□ -0.1
FXN-201ENST00000377270 GFOD2Q3B7J2 385 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 ARMC6Q6NXE6 501 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 ZNF730Q6ZMV8 503 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 NRSN1Q8IZ57 195 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 PRSS35Q8N3Z0 413 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 VN1R2Q8NFZ6 395 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 OR4C15Q8NGM1 316 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 NEIL2Q969S2 332 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 CCNL2Q96S94 520 aaPredicted RBP14.42□□□□□ -0.1
FXN-201ENST00000377270 CHIAQ9BZP6 476 aa14.42□□□□□ -0.1
FXN-201ENST00000377270 FAM120CQ9NX05 1096 aaKnown RBP14.42□□□□□ -0.1
FXN-201ENST00000377270 COMMD3Q9UBI1 195 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms