RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CDC14CA4D256 554 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC22A31A6NKX4 558 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ARPC5O15511 151 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 DNAJB6O75190 326 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LCN1P31025 176 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAT1AQ00266 395 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RUNX3Q13761 415 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ENPP2Q13822 863 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 DCST2Q5T1A1 773 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF770Q6IQ21 691 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF627Q7L945 461 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 KANSL1Q7Z3B3 1105 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 UBE3DQ7Z6J8 389 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C17orf47Q8NEP4 570 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SMARCD2Q92925 531 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ATF6BQ99941 703 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SEC22CQ9BRL7 303 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR8D2Q9GZM6 311 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TBC1D29Q9UFV1 150 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PRELID1Q9Y255 219 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FARSAQ9Y285 508 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TRDV1A0A1B0GX56 115 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CASC3O15234 703 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SOD1P00441 154 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CSTAP01040 98 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CA3P07451 260 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PSMA6P60900 246 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FOXK2Q01167 660 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RPE65Q16518 533 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SCGB2B2Q4G0G5 96 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMEM35AQ53FP2 167 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 Q5BKY6 102 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMEM69Q5SWH9 247 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FIGLAQ6QHK4 219 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF836Q6ZNA1 936 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR5J2Q8NH18 312 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LGALS14Q8TCE9 139 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 DERL3Q96Q80 235 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR2M4Q96R27 311 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LMF1Q96S06 567 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EVA1BQ9NVM1 165 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 A0A0A6YYC8 382 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 IDSB3KWA1 339 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 I3L1I5 382 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EIF1AYO14602 144 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF780AO75290 641 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ARL6IP5O75915 188 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ALX3O95076 343 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAKP20794 623 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GJA4P35212 333 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MNDAP41218 407 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GRK6P43250 576 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 VEGFCP49767 419 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 AKR1D1P51857 326 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HSF2Q03933 536 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 YOD1Q5VVQ6 348 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RIT1Q92963 219 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MS4A4EQ96PG1 132 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMEM43Q9BTV4 400 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZSCAN32Q9NX65 697 aa13.36□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SHISA3A0PJX4 238 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FGF19O95750 216 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR8G3PP0DMU2 310 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TPBGQ13641 420 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ELOAQ14241 798 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAPK14Q16539 360 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GFOD2Q3B7J2 385 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 AMZ1Q400G9 498 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 THSD4Q6ZMP0 1018 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF782Q6ZMW2 699 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF620Q6ZNG0 422 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CHST4Q8NCG5 386 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR4D9Q8NGE8 314 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR9A4Q8NGU2 314 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C1QTNF2Q9BXJ5 285 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZMAT3Q9HA38 289 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ING1Q9UK53 422 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 DNAH14Q0VDD8 3507 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TCRBP04435 133 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ARHGDIBP52566 201 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RNF165Q6ZSG1 346 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RDH10Q8IZV5 341 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SHISA5Q8N114 240 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TEAD3Q99594 435 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ELF4Q99607 663 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ULBP3Q9BZM4 244 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SIRT4Q9Y6E7 314 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HEATR5BQ9P2D3 2071 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMEM129A0AVI4 362 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CARNS1A5YM72 827 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 F3P13726 295 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TBXA2RP21731 343 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC6A6P31641 620 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MLF2Q15773 248 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 WDR45BQ5MNZ6 344 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MFSD12Q6NUT3 480 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms