RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 A0A1W2PNR3 127 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 GOLGA8OA6NCC3 632 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 TMEM233B4DJY2 109 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 GOLGA8NF8WBI6 632 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 SMAD9O15198 467 aaKnown RBP20.54■□□□□ 0.88
C9orf47-202ENST00000375850 CFLARO15519 480 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 STX11O75558 287 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 PGM3O95394 542 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 GGT1P19440 569 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 ALDH3A1P30838 453 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 ACVR1BP36896 505 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 CDKN1AP38936 164 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 C21orf58P58505 322 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 STK11Q15831 433 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 ZNF141Q15928 474 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 C6orf136Q5SQH8 315 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 AGAP6Q5VW22 663 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 GSPT2Q8IYD1 628 aaKnown RBP20.54■□□□□ 0.88
C9orf47-202ENST00000375850 ZNF100Q8IYN0 542 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 RFWD2Q8NHY2 731 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 OR5B2Q96R09 309 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 ANKZF1Q9H8Y5 726 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 MGAT4BQ9UQ53 548 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 SPIN1Q9Y657 262 aaPredicted RBP20.54■□□□□ 0.88
C9orf47-202ENST00000375850 KCNE3Q9Y6H6 103 aa20.54■□□□□ 0.88
C9orf47-202ENST00000375850 IGHV3-15A0A0B4J1V0 119 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 ESPNB1AK53 854 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 LYZL6O75951 148 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 IGHV4-39P01824 125 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 PGCP20142 388 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 FKBP2P26885 142 aaKnown RBP20.53■□□□□ 0.88
C9orf47-202ENST00000375850 FAPQ12884 760 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 SKP2Q13309 424 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 TIGD2Q4W5G0 525 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 PDZK1Q5T2W1 519 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 IL23RQ5VWK5 629 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 PODNL1Q6PEZ8 512 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 TMPPEQ6ZT21 453 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 RIMKLAQ8IXN7 391 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 NEUROG1Q92886 237 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 DUSP26Q9BV47 211 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 ATRQ13535 2644 aa20.53■□□□□ 0.88
C9orf47-202ENST00000375850 OR5H1A6NKK0 313 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 ANKRD28O15084 1053 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 AGR2O95994 175 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 GUSBP08236 651 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 CDH11P55287 796 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 NDUFAF6Q330K2 333 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 TMEM108Q6UXF1 575 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 EIF3MQ7L2H7 374 aaKnown RBP20.52■□□□□ 0.88
C9orf47-202ENST00000375850 ZHX1-C8orf76Q96EF9 292 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 ADAD1Q96M93 576 aaKnown RBP20.52■□□□□ 0.88
C9orf47-202ENST00000375850 THUMPD3Q9BV44 507 aaKnown RBP20.52■□□□□ 0.88
C9orf47-202ENST00000375850 EXD2Q9NVH0 621 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 PRSS50Q9UI38 385 aa20.52■□□□□ 0.88
C9orf47-202ENST00000375850 COL6A5A8TX70 2615 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 IGKV3D-15A0A087WSY6 115 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 SHISA9B4DS77 424 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 DNPH1O43598 174 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 SLU7O95391 586 aaKnown RBP20.51■□□□□ 0.87
C9orf47-202ENST00000375850 H6PDO95479 791 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 CSTAP01040 98 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 MATN1P21941 496 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 SOAT1P35610 550 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 DIO1P49895 249 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 RNF144AP50876 292 aaPredicted RBP20.51■□□□□ 0.87
C9orf47-202ENST00000375850 SESN3P58005 492 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 DSCR9P59020 149 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 HBA1P69905 142 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 SMU1Q2TAY7 513 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 ARHGAP11BQ3KRB8 267 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 SYT14P1Q58G82 188 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 MTDHQ86UE4 582 aaKnown RBP20.51■□□□□ 0.87
C9orf47-202ENST00000375850 HIPK1Q86Z02 1210 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 MAPK1IP1LQ8NDC0 245 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 OR5D16Q8NGK9 328 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 ZNF75CPQ92670 426 aaPredicted RBP20.51■□□□□ 0.87
C9orf47-202ENST00000375850 ZIM3Q96PE6 472 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 RHNO1Q9BSD3 238 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 C1orf50Q9BV19 199 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 REPIN1Q9BWE0 567 aaKnown RBP20.51■□□□□ 0.87
C9orf47-202ENST00000375850 POLE3Q9NRF9 147 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 ACER3Q9NUN7 267 aa20.51■□□□□ 0.87
C9orf47-202ENST00000375850 SULT2B1O00204 365 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 GPR171O14626 319 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 ABCD4O14678 606 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 CD8AP01732 235 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 IGHV1-2P23083 117 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 PTAFRP25105 342 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 APOBEC1P41238 236 aaKnown RBP20.5■□□□□ 0.87
C9orf47-202ENST00000375850 CLK1P49759 484 aaKnown RBP20.5■□□□□ 0.87
C9orf47-202ENST00000375850 MERTKQ12866 999 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 GPR68Q15743 365 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 C1QTNF12Q5T7M4 302 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 FBXW9Q5XUX1 488 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 ABLIM2Q6H8Q1 611 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 KLHL17Q6TDP4 642 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 ATG4DQ86TL0 474 aaPredicted RBP20.5■□□□□ 0.87
C9orf47-202ENST00000375850 KRTCAP2Q8N6L1 136 aa20.5■□□□□ 0.87
C9orf47-202ENST00000375850 ZNF433Q8N7K0 673 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms