RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ACOT13Q9NPJ3 140 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 MRPL15Q9P015 296 aaKnown RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 A8MV72 311 aaPredicted RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 TSFMP43897 325 aaKnown RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 AP2S1P53680 142 aaPredicted RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 EFR3AQ14156 821 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 SLCO4A1Q96BD0 722 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC35A4Q96G79 324 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 PCM1Q15154 2024 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 MFSD13AQ14CX5 517 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 AKIRIN2Q53H80 203 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 GARNL3Q5VVW2 1013 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 NKAIN4Q8IVV8 208 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 SYNPOQ8N3V7 929 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC15A4Q8N697 577 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 TESQ9UGI8 421 aaKnown RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 KLHL21Q9UJP4 597 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 PADI1Q9ULC6 663 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 AK6Q9Y3D8 172 aaKnown RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 FOCADQ5VW36 1801 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 A0A1W2PQL4 384 aaPredicted RBP16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 HTR3EA5X5Y0 456 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 KDM4EB2RXH2 506 aaPredicted RBP16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 GLULP15104 373 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 TCN2P20062 427 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 TMEM176BQ3YBM2 270 aaPredicted RBP16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 DCAF12Q5T6F0 453 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 CCDC80Q76M96 950 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 OR14A16Q8NHC5 309 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 MAFAQ8NHW3 353 aaPredicted RBP16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 A4GALTQ9NPC4 353 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 F5H5K5 113 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 ZNF45Q02386 682 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 RUNX2Q13950 521 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 TBC1D25Q3MII6 688 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 PRAMEF17Q5VTA0 474 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 ATP13A2Q9NQ11 1180 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 WASH6PQ9NQA3 447 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 INIPQ9NRY2 104 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 TMPRSS11EQ9UL52 423 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 GRIP1Q9Y3R0 1128 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 CACNA1GO43497 2377 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 GALR3O60755 368 aaPredicted RBP16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 BCAP31P51572 246 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 HES5Q5TA89 166 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 CLEC1AQ8NC01 280 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 TSLPQ969D9 159 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 SDF2Q99470 211 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 ATG5Q9H1Y0 275 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 MBTPS2O43462 519 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 UTS2O95399 124 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 GPLD1P80108 840 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 SMCO1Q147U7 214 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC35F2Q8IXU6 374 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 LINC01555Q8NAE3 123 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 C8orf44Q96CB5 159 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 LMF1Q96S06 567 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 TBC1D24Q9ULP9 559 aa16.68■□□□□ 0.26
PTPDC1-202ENST00000375360 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 A0A1B0GX78 115 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 DCDC2BA2VCK2 349 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 WRBO00258 174 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 ATE1O95260 518 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 IL9P15248 144 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 RAB3BP20337 219 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 POU3F4P49335 361 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 RGS6P49758 472 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC14A1Q13336 389 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 NKAPLQ5M9Q1 402 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 KDM8Q8N371 416 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 AMER3Q8N944 861 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 NPRL2Q8WTW4 380 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 CSF3RQ99062 836 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 LRRC61Q9BV99 259 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 IRF2BPLQ9H1B7 796 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 SCN10AQ9Y5Y9 1956 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 TEX13CA0A0J9YWL9 993 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 IGFBP1P08833 259 aaPredicted RBP16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 HOXB3P14651 431 aaPredicted RBP16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 OPRL1P41146 370 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 RIN1Q13671 783 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 C3orf38Q5JPI3 329 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 GDF7Q7Z4P5 450 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 PAQR7Q86WK9 346 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 OR8H1Q8NGG4 311 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 TMEM163Q8TC26 289 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 ZFPM2Q8WW38 1151 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 C4orf36Q96KX1 117 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 SH3PXD2BA1X283 911 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 C5orf67F2Z3F1 127 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 MMP11P24347 488 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 DCAF7P61962 342 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 EEF1A1P68104 462 aaKnown RBP16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 TMEM69Q5SWH9 247 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 OPN5Q6U736 354 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 LSM14AQ8ND56 463 aaKnown RBP16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 ABCG5Q9H222 651 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 DPAGT1Q9H3H5 408 aa16.67■□□□□ 0.26
PTPDC1-202ENST00000375360 ACAD8Q9UKU7 415 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms