RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 HOXB2P14652 356 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 IFNGR1P15260 489 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 SDHBP21912 280 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 PTAFRP25105 342 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CTHP32929 405 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CBSP35520 551 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 SLC1A3P43003 542 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 SHC2P98077 582 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF630Q2M218 657 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 FAM74A1Q5RGS3 127 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 COX20Q5RI15 118 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 ZC3H14Q6PJT7 736 aaKnown RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 LDLRAD3Q86YD5 345 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 OR6V1Q8N148 313 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 KLHL36Q8N4N3 616 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 RASGEF1AQ8N9B8 481 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 FXYD6Q9H0Q3 95 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CD207Q9UJ71 328 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 OR2M5A3KFT3 312 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 C1QTNF3-AMACRE9PGA6 284 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 GPR31O00270 319 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 LCMT2O60294 686 aaKnown RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 OR2A4O95047 310 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 SPDEFO95238 335 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 WNT1P04628 370 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 PSMA3P25788 255 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 MVDP53602 400 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 GMFBP60983 142 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CST6Q15828 149 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 MINDY4Q4G0A6 757 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CCSMST1Q4G0I0 132 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 PRAMEF13Q5VWM6 474 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 ELP2Q6IA86 826 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 TRIM40Q6P9F5 258 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF613Q6PF04 617 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 UBE2R2Q712K3 238 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 FBXO15Q8NCQ5 510 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 OR52N2Q8NGI0 321 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 NUS1Q96E22 293 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 MED8Q96G25 268 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 OR2A7Q96R45 310 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 GAS2L1Q99501 681 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 PAPOLGQ9BWT3 736 aaKnown RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 LGR4Q9BXB1 951 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 OR10A4Q9H209 315 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM38AQ9H6F2 299 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 EXOSC3Q9NQT5 275 aaKnown RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CA10Q9NS85 328 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 THAP10Q9P2Z0 257 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 RUVBL1Q9Y265 456 aaKnown RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 K7EQS6 105 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 SPINT1O43278 529 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 CREBL2O60519 120 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 RAD1O60671 282 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 CD79BP40259 229 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 C21orf58P58505 322 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 LRRC74AQ0VAA2 488 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 SEC23BQ15437 767 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 FRG2Q64ET8 278 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 SFRP4Q6FHJ7 346 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 DHRS7BQ6IAN0 325 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 CBLN2Q8IUK8 224 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PUSL1Q8N0Z8 303 aaKnown RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 DEFB119Q8N690 84 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 SMRP1Q8NCR6 262 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 DMBX1Q8NFW5 382 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 OR14A16Q8NHC5 309 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 SETD7Q8WTS6 366 aaKnown RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 GLYATL1Q969I3 302 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ORAI1Q96D31 301 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 FRG2BQ96QU4 278 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 C14orf105Q9NVL8 296 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PCYT1BQ9Y5K3 369 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 HELZP42694 1942 aaKnown RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 TRBV23OR9-2A0A075B6M9 112 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 A0A1W2PRB8 838 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 GSAPA4D1B5 854 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 CRYBA1P05813 215 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 H1F0P07305 194 aaKnown RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ANKRD34CP0C6C1 535 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 SELLP14151 372 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 COL9A1P20849 921 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ASMTP46597 345 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 RPIAP49247 311 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 RAB5BP61020 215 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ACSM2AQ08AH3 577 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 DDX39BQ13838 428 aaKnown RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 KLF9Q13886 244 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM196Q5HYL7 178 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ACSM2BQ68CK6 577 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF425Q6IV72 752 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PGBD2Q6P3X8 592 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms