RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 WDPCPO95876 746 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ZNF806P0C7X5 589 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 HPGDP15428 266 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 MAP3K8P41279 467 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 MAZP56270 477 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 HNRNPKP61978 463 aaKnown RBP eCLIP7.61□□□□□ -1.19
UBR4-202ENST00000375224 MGAT2Q10469 447 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 STX4Q12846 297 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ZNF155Q12901 538 aaPredicted RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 UBXN2BQ14CS0 331 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 BTBD16Q32M84 506 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 CREB3L2Q70SY1 520 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 SFTPA2Q8IWL1 248 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 TMEM52Q8NDY8 209 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 OR4D10Q8NGI6 311 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 OR9A4Q8NGU2 314 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 RFKQ969G6 155 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 RBM18Q96H35 190 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 C6orf62Q9GZU0 229 aaPredicted RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 CHRNA10Q9GZZ6 450 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 MRPS18AQ9NVS2 196 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 GRIP1Q9Y3R0 1128 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 MYL12BO14950 172 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 PRODHO43272 600 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 PRKYO43930 277 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 NSA2O95478 260 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 SCG5P05408 212 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ZNF250P15622 560 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 GABRA3P34903 492 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 TRHRP34981 398 aaPredicted RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 PPP1CAP62136 330 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 EFNB1P98172 346 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ACSM5Q6NUN0 579 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 SPATC1Q76KD6 591 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 SLC34A3Q8N130 599 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 FAM160A2Q8N612 972 aaPredicted RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 IQCF1Q8N6M8 205 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 IL17RDQ8NFM7 739 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 HOXB13Q92826 284 aaPredicted RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 RPL3LQ92901 407 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 FAM46AQ96IP4 442 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 LRR1Q96L50 414 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 PELOQ9BRX2 385 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 BCL2L14Q9BZR8 327 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 STARD5Q9NSY2 213 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 TESQ9UGI8 421 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 BRINP1O60477 761 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 GLAP06280 429 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 SELLP14151 372 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 MYL12AP19105 171 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 SOX18P35713 384 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 PPM1FP49593 454 aaPredicted RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 SNRPD2P62316 118 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 RAB40BQ12829 278 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 BAMBIQ13145 260 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 SPHARQ15513 63 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ZNF404Q494X3 552 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 SYT14P1Q58G82 188 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 TMEM81Q6P7N7 255 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 C19orf48Q6RUI8 117 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 UBQLNLQ8IYU4 475 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 CDK20Q8IZL9 346 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 MFSD4AQ8N468 514 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ARHGEF39Q8N4T4 335 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 NANOGP1Q8N7R0 232 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 UBASH3BQ8TF42 649 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ZNF582Q96NG8 517 aaPredicted RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 CD180Q99467 661 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 GPA33Q99795 319 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 ZNF559Q9BR84 538 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 LMF2Q9BU23 707 aaKnown RBP7.61□□□□□ -1.19
UBR4-202ENST00000375224 RAB33BQ9H082 229 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 DSN1Q9H410 356 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 TMEM74BQ9NUR3 256 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 MLXQ9UH92 298 aa7.61□□□□□ -1.19
UBR4-202ENST00000375224 TMEM131Q92545 1883 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 TFECO14948 347 aaPredicted RBP7.6□□□□□ -1.19
UBR4-202ENST00000375224 SGCEO43556 437 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 APOL3O95236 402 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 WNT1P04628 370 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 SPNP16150 400 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 SOX6P35712 828 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 MEOX2P50222 304 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 EPHA4P54764 986 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 PSMD4P55036 377 aaKnown RBP7.6□□□□□ -1.19
UBR4-202ENST00000375224 GAS6Q14393 721 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 TAB1Q15750 504 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 TSTQ16762 297 aaKnown RBP7.6□□□□□ -1.19
UBR4-202ENST00000375224 SWI5Q1ZZU3 235 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 DEFB110Q30KQ9 67 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 C3orf38Q5JPI3 329 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 MRPL2Q5T653 305 aaKnown RBP7.6□□□□□ -1.19
UBR4-202ENST00000375224 RPL13AP3Q6NVV1 102 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 COMMD7Q86VX2 200 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 C17orf82Q86X59 251 aaPredicted RBP7.6□□□□□ -1.19
UBR4-202ENST00000375224 NKAIN4Q8IVV8 208 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 NRMQ8IXM6 262 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 TIGD4Q8IY51 512 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 CAMKK1Q8N5S9 505 aa7.6□□□□□ -1.19
UBR4-202ENST00000375224 OR52R1Q8NGF1 315 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms