RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PCDH17O14917 1159 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 PLRG1O43660 514 aaKnown RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 B4GALT2O60909 372 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 PFDN1O60925 122 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 GUCY1B2O75343 617 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SERPINB7O75635 380 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SULT1C4O75897 302 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 MFN2O95140 757 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 GADD45GO95257 159 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 VIPP01282 170 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 MBPP02686 304 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 LCKP06239 509 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 BCHEP06276 602 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 HOXC4P09017 264 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 TMIGD3P0DMS9 266 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 MYOGP15173 224 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 CD36P16671 472 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 ELAVL4P26378 380 aaKnown RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 PSMB5P28074 263 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 PPP2R1BP30154 601 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 GALNSP34059 522 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 IDUAP35475 653 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 AHRP35869 848 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OPRL1P41146 370 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SSR2P43308 183 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TNFRSF4P43489 277 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OR1E2P47887 323 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 KHKP50053 298 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 LIMK1P53667 647 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 CRISP1P54107 249 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 UGT2B15P54855 530 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SMIM11AP58511 58 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 LINC00205P59089 165 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 KRTAP10-9P60411 292 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 CDC42P60953 191 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SNRPGP62308 76 aaKnown RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 TUBA1BP68363 451 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OLR1P78380 273 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TMED1Q13445 227 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 NR1D2Q14995 579 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 MLF2Q15773 248 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 NDUFA9Q16795 377 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 DUSP7Q16829 419 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 RGS21Q2M5E4 152 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 ITPRIPL2Q3MIP1 535 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 PRAMEF8Q5VWM4 474 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 PRAMEF7Q5VXH5 474 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SLX4IPQ5VYV7 408 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OR4C11Q6IEV9 310 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 C16orf87Q6PH81 154 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TMEM184AQ6ZMB5 413 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 Q6ZPB1 254 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 TUBA1AQ71U36 451 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 ZNF367Q7RTV3 350 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SLC46A3Q7Z3Q1 461 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 IGFN1Q86VF2 1251 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SLC44A2Q8IWA5 706 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 TAGAPQ8N103 731 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 MMP21Q8N119 569 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 HDDC3Q8N4P3 179 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 LINC00471Q8N535 108 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 C2orf73Q8N5S3 287 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 TBC1D19Q8N5T2 526 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 IL17RCQ8NAC3 791 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 AQP11Q8NBQ7 271 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 GPR32P1Q8NGA4 272 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OR9Q2Q8NGE9 314 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OR6Q1Q8NGQ2 317 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OR2A1Q8NGT9 310 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 BBS10Q8TAM1 723 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 NDNFQ8TB73 568 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SLC38A5Q8WUX1 472 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 PROX1Q92786 737 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 GGHQ92820 318 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 ELSPBP1Q96BH3 223 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SH3YL1Q96HL8 342 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 SLC35G5Q96KT7 338 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 ZNF354BQ96LW1 612 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 C12orf66Q96MD2 445 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 CAMK1GQ96NX5 476 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 PRAP1Q96NZ9 151 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TEFMQ96QE5 360 aaKnown RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 ZNF607Q96SK3 696 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 NIPSNAP1Q9BPW8 284 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 FUZQ9BT04 418 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 DPH7Q9BTV6 452 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 ACAT2Q9BWD1 397 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 FAIM2Q9BWQ8 316 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 CDCA4Q9BXL8 241 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 AICDAQ9GZX7 198 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 RACGAP1Q9H0H5 632 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 KIR3DX1Q9H7L2 352 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 NMNAT1Q9HAN9 279 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 BCL2L10Q9HD36 194 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 FZD3Q9NPG1 666 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 MBNL1Q9NR56 388 aaKnown RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 POT1Q9NUX5 634 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TMEM160Q9NX00 188 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 IMPAD1Q9NX62 359 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TEX10Q9NXF1 929 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms