RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 FAF1Q9UNN5 650 aaPredicted RBP12.18□□□□□ -0.46
CXCL12-202ENST00000374426 OR5H1A6NKK0 313 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF724A8MTY0 619 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 TMEM114B3SHH9 223 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 COPEO14579 308 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF264O43296 627 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 EIF4E2O60573 245 aaKnown RBP12.17□□□□□ -0.46
CXCL12-202ENST00000374426 DNAJA2O60884 412 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 PGM3O95394 542 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 C6orf47O95873 294 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 CHRNGP07510 517 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 FGF4P08620 206 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 KRT16P08779 473 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 UBL4AP11441 157 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 DDX5P17844 614 aaKnown RBP12.17□□□□□ -0.46
CXCL12-202ENST00000374426 KRT4P19013 534 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 GGT1P19440 569 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 CCR4P51679 360 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 IRX1P78414 480 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-202ENST00000374426 SKP2Q13309 424 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 PTGR1Q14914 329 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 NRF1Q16656 503 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 TIGD2Q4W5G0 525 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 PDZK1Q5T2W1 519 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 C6orf52Q5T4I8 152 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 C11orf71Q6IPW1 123 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 C3orf33Q6P1S2 294 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 P2RY8Q86VZ1 359 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF433Q8N7K0 673 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-202ENST00000374426 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 OR10H5Q8NGA6 315 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 OR5B2Q96R09 309 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 RHNO1Q9BSD3 238 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 QRSL1Q9H0R6 528 aaKnown RBP12.17□□□□□ -0.46
CXCL12-202ENST00000374426 TRAF6Q9Y4K3 522 aa12.17□□□□□ -0.46
CXCL12-202ENST00000374426 CENPVL1A0A0U1RR11 272 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 FAM234BA2RU67 622 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 SERINC4A6NH21 518 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 SMIM23A6NLE4 172 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 E7EQL1 145 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 TRIM13O60858 407 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 RPL3P39023 403 aaKnown RBP12.16□□□□□ -0.46
CXCL12-202ENST00000374426 DIO1P49895 249 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 NUDT6P53370 316 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 SPOCK1Q08629 439 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 CBFBQ13951 182 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 TMEM249Q2WGJ8 235 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 SPDYE7PQ495Y7 208 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 XKR7Q5GH72 579 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 ARL13AQ5H913 290 aaPredicted RBP12.16□□□□□ -0.46
CXCL12-202ENST00000374426 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 SSX8Q7RTT4 187 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 GALNT5Q7Z7M9 940 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF100Q8IYN0 542 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 C4orf33Q8N1A6 199 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 KRTCAP2Q8N6L1 136 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 OR5D16Q8NGK9 328 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 OR5AK3PQ8NH89 298 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 SFXN5Q8TD22 340 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 TMEM158Q8WZ71 300 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 COQ8BQ96D53 544 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 RADILQ96JH8 1075 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 OR7D2Q96RA2 312 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 SDF2Q99470 211 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 CACNG6Q9BXT2 260 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 NMUR2Q9GZQ4 415 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 KCNE5Q9UJ90 142 aa12.16□□□□□ -0.46
CXCL12-202ENST00000374426 IGKV3D-15A0A087WSY6 115 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 PEX11AO75192 247 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 RAD51DO75771 328 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 IGHV3-9P01782 118 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 FAM157CP0CG43 387 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 MAPK1P28482 360 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 TTKP33981 857 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 SESN3P58005 492 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 RPS26P62854 115 aaKnown RBP12.15□□□□□ -0.46
CXCL12-202ENST00000374426 LSM12Q3MHD2 195 aaKnown RBP12.15□□□□□ -0.46
CXCL12-202ENST00000374426 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 TMPPEQ6ZT21 453 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
CXCL12-202ENST00000374426 EPS8L3Q8TE67 593 aaKnown RBP12.15□□□□□ -0.46
CXCL12-202ENST00000374426 ST8SIA1Q92185 356 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 HTRA1Q92743 480 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 PPP3R2Q96LZ3 170 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 C3orf30Q96M34 536 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 ADAD1Q96M93 576 aaKnown RBP12.15□□□□□ -0.46
CXCL12-202ENST00000374426 TNFRSF13CQ96RJ3 184 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 RHOXF2Q9BQY4 288 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 C1orf50Q9BV19 199 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 THUMPD3Q9BV44 507 aaKnown RBP12.15□□□□□ -0.46
CXCL12-202ENST00000374426 LAT2Q9GZY6 243 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 SERHL2Q9H4I8 314 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 CBLN4Q9NTU7 201 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 ATAD3AQ9NVI7 634 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 MID2Q9UJV3 735 aa12.15□□□□□ -0.46
CXCL12-202ENST00000374426 ELOA3DA6NLF2 546 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms