RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 COMMD6Q7Z4G1 85 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 OR5D16Q8NGK9 328 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 OR4Q3Q8NH05 313 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 C16orf78Q8WTQ4 265 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 TRIM43Q96BQ3 446 aaPredicted RBP12□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF607Q96SK3 696 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 FAM117AQ9C073 453 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 PCDHB10Q9UN67 800 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 CKAP5Q14008 2032 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 PIP5K1CO60331 668 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 REM1O75628 298 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 PCDH8O95206 1070 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 FPR3P25089 353 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 CAPZA1P52907 286 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 BLOC1S1P78537 153 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 SMCO1Q147U7 214 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 CSRP2Q16527 193 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 SGCAQ16586 387 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 FAM71E1Q6IPT2 247 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 H3F3CQ6NXT2 135 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 OR2W3Q7Z3T1 314 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 SERINC5Q86VE9 423 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 TEX19Q8NA77 164 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 OR2AK2Q8NG84 335 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 OR1S2Q8NGQ3 325 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 TBX5Q99593 518 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 MRPL17Q9NRX2 175 aaKnown RBP12□□□□□ -0.49
PRPF4-201ENST00000374198 GHRLQ9UBU3 117 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 NOD1Q9Y239 953 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 PIKFYVEQ9Y2I7 2098 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 SCN8AQ9UQD0 1980 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 CHD5Q8TDI0 1954 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 ANKRD20A5PA0PJZ0 165 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 H3BNC9 293 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 SLC16A5O15375 505 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF749O43361 778 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 CLDN7O95471 211 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 FOLR2P14207 255 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 AHRP35869 848 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 NPBWR1P48145 328 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 TAS2R50P59544 299 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 PPIAP62937 165 aaKnown RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 TSPAN31Q12999 210 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 ZDHHC20Q5W0Z9 365 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 SYT9Q86SS6 491 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 TBC1D19Q8N5T2 526 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 EID2Q8N6I1 236 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 BRIX1Q8TDN6 353 aaKnown RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 FCAMRQ8WWV6 532 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 BADQ92934 168 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 CLP1Q92989 425 aaKnown RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 NEURL3Q96EH8 262 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 CNIH4Q9P003 139 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF106Q9H2Y7 1883 aaKnown RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 A0A087WUU8 490 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 TRAV1-2A0A0B4J238 106 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF729A6NN14 1252 aaPredicted RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 PYCARD-AS1I3L0S3 204 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 M0QZQ0 153 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 ICOSLGO75144 302 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 MPC1LP0DKB6 136 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 GNSP15586 552 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 BDKRB2P30411 391 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 CSNK1DP48730 415 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 PSEN2P49810 448 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 CRYBB1P53674 252 aaPredicted RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 CDH4P55283 916 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 RPS24P62847 133 aaKnown RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 RNF212Q495C1 297 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 CD300LGQ6UXG3 332 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 SLC36A1Q7Z2H8 476 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 TMEM99Q8N816 258 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 DNAAF1Q8NEP3 725 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF671Q8TAW3 534 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 LGALS14Q8TCE9 139 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 TRMT2BQ96GJ1 504 aaKnown RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 TEX12Q9BXU0 123 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 MED17Q9NVC6 651 aa11.99□□□□□ -0.49
PRPF4-201ENST00000374198 RPH3AQ9Y2J0 694 aaPredicted RBP11.99□□□□□ -0.49
PRPF4-201ENST00000374198 A0A0D9SG52 128 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 RFPL4AA6NLU0 287 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 RFPL4AL1F8VTS6 287 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 FMO6PO60774 539 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 SLC2A10O95528 541 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 MRPL58Q14197 206 aaKnown RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 MPPED2Q15777 294 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 ACER2Q5QJU3 275 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 HENMT1Q5T8I9 393 aaKnown RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 FAM180BQ6P0A1 224 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 TSSK4Q6SA08 328 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 OR6T1Q8NGN1 323 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 PRRC1Q96M27 445 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 SMAD5Q99717 465 aaKnown RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 SLC6A16Q9GZN6 736 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 TLNRD1Q9H1K6 362 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 WDR13Q9H1Z4 485 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 MYNNQ9NPC7 610 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 TDP1Q9NUW8 608 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms