RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 TRAV27A0A087WT01 109 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ISPDA4D126 451 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SYNDIG1LA6NDD5 238 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PRR23D1E9PI22 279 aaPredicted RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 J3QRE1 110 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SLC30A4O14863 429 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PLD2O14939 933 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 DYRK3O43781 588 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 IL1AP01583 271 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 NGFRP08138 427 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 GIMD1P0DJR0 217 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PRR23D2P0DMB1 279 aaPredicted RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SPTBP11277 2137 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PAICSP22234 425 aaKnown RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 GABRA5P31644 462 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 CD79BP40259 229 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PPICP45877 212 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SLC37A1P57057 533 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 GPLD1P80108 840 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ACSM1Q08AH1 577 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ZNF181Q2M3W8 571 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SNAP47Q5SQN1 464 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ARMC4Q5T2S8 1044 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 GATAD2AQ86YP4 633 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SLC43A2Q8N370 569 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 Q8N9G6 341 aaPredicted RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 OR52N1Q8NH53 320 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 OR1L3Q8NH93 324 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PTP4A1Q93096 173 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SLC46A1Q96NT5 459 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 TNFRSF13CQ96RJ3 184 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ELF4Q99607 663 aaPredicted RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 BARHL1Q9BZE3 327 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 MED20Q9H944 212 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SEMA5BQ9P283 1151 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PCDH15Q96QU1 1955 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 FUOMA2VDF0 154 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 RIIAD1A6NNX1 92 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 CTDSP2O14595 271 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 PEPDP12955 493 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 MYF5P13349 255 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 RORAP35398 523 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 GPR143P51810 404 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 COPZ1P61923 177 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 RPS25P62851 125 aaKnown RBP12.31□□□□□ -0.44
CSTF2-201ENST00000372972 CRYZQ08257 329 aaKnown RBP12.31□□□□□ -0.44
CSTF2-201ENST00000372972 SPANXN2Q5MJ10 180 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 C22orf42Q6IC83 251 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 QSOX2Q6ZRP7 698 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 CCDC190Q86UF4 302 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 ZNF440Q8IYI8 595 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 GPR135Q8IZ08 494 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 ACBD7Q8N6N7 88 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 SIRT6Q8N6T7 355 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 ZSCAN1Q8NBB4 408 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 SLC37A3Q8NCC5 494 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 OR51G2Q8NGK0 314 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.31□□□□□ -0.44
CSTF2-201ENST00000372972 DNAJA4Q8WW22 397 aaPredicted RBP12.31□□□□□ -0.44
CSTF2-201ENST00000372972 OIT3Q8WWZ8 545 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 CLIP3Q96DZ5 547 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 NDC1Q9BTX1 674 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 DHCR7Q9UBM7 475 aaKnown RBP12.31□□□□□ -0.44
CSTF2-201ENST00000372972 SERTAD3Q9UJW9 196 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 GSTK1Q9Y2Q3 226 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 CLCA3PQ9Y6N3 262 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 TECTAO75443 2155 aa12.31□□□□□ -0.44
CSTF2-201ENST00000372972 IGKV3D-11A0A0A0MRZ8 115 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 SLC22A31A6NKX4 558 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 A8MUA0 341 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 AKAP8O43823 692 aaKnown RBP12.3□□□□□ -0.44
CSTF2-201ENST00000372972 CDRT1O95170 752 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 FOLR1P15328 257 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 HK1P19367 917 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 TGM1P22735 817 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 SLC6A6P31641 620 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 ADH7P40394 386 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 ARRB1P49407 418 aaPredicted RBP12.3□□□□□ -0.44
CSTF2-201ENST00000372972 RUNX1T1Q06455 604 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 NDUFAF6Q330K2 333 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 CRTC2Q53ET0 693 aaPredicted RBP12.3□□□□□ -0.44
CSTF2-201ENST00000372972 ZNF362Q5T0B9 420 aaPredicted RBP12.3□□□□□ -0.44
CSTF2-201ENST00000372972 B3GLCTQ6Y288 498 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 PLEKHG7Q6ZR37 379 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 ZNF554Q86TJ5 538 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 LYSMD2Q8IV50 215 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 SLITRK4Q8IW52 837 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 ZNF527Q8NB42 609 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 DRAXINQ8NBI3 349 aaPredicted RBP12.3□□□□□ -0.44
CSTF2-201ENST00000372972 SNRNP27Q8WVK2 155 aaKnown RBP12.3□□□□□ -0.44
CSTF2-201ENST00000372972 SLC25A46Q96AG3 418 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 EFHD2Q96C19 240 aaPredicted RBP12.3□□□□□ -0.44
CSTF2-201ENST00000372972 SLC41A2Q96JW4 573 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 CEP19Q96LK0 163 aa12.3□□□□□ -0.44
CSTF2-201ENST00000372972 KCTD7Q96MP8 289 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms