RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZSCAN4Q8NAM6 433 aaPredicted RBP16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 OR52I1Q8NGK6 324 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 SLC22A8Q8TCC7 542 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 SAMD11Q96NU1 681 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 OR1F2PQ96R84 312 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 EMC7Q9NPA0 242 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 CLEC2DQ9UHP7 191 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF281Q9Y2X9 895 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 MYH9P35579 1960 aaKnown RBP16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 SMCO3A2RU48 225 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 CDHR4A6H8M9 788 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 FAM221BA6H8Z2 402 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 SMLR1H3BR10 107 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 LCMT2O60294 686 aaKnown RBP16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 ALX3O95076 343 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 HLA-AP01891 365 aaKnown RBP16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 PROS1P07225 676 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 TIMP2P16035 220 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 PLGLB1Q02325 96 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 HENMT1Q5T8I9 393 aaKnown RBP16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 DEFB126Q9BYW3 111 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 ASIC5Q9NY37 505 aa16.04■□□□□ 0.16
PTP4A1-201ENST00000370651 TRDV1A0A1B0GX56 115 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 IMPA1P29218 277 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 ARRB1P49407 418 aaPredicted RBP16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 GLO1Q04760 184 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 HYAL4Q2M3T9 481 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 BEX5Q5H9J7 111 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 OR51T1Q8NGJ9 327 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 STK35Q8TDR2 534 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 ZIC5Q96T25 663 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 ALOXE3Q9BYJ1 711 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 CXCL16Q9H2A7 254 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 DUSP21Q9H596 190 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 KCMF1Q9P0J7 381 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 A0A0D9SG52 128 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 TNFRSF10AO00220 468 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 VIPR2P41587 438 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 PSPHP78330 225 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 RFPL4BQ6ZWI9 263 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 ACTR10Q9NZ32 417 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 URB1O60287 2271 aaKnown RBP16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 TAPBPO15533 448 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 SULT1C4O75897 302 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 C1SP09871 688 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 ITGB7P26010 798 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 ALDH3B1P43353 468 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 DEFB110Q30KQ9 67 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 LCN10Q6JVE6 187 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 GDPD3Q7L5L3 318 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 CD163Q86VB7 1156 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 NLRP8Q86W28 1048 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 GHSRQ92847 366 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 CTRCQ99895 268 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 MED20Q9H944 212 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 HHLA2Q9UM44 414 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 CYP8B1Q9UNU6 501 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 CORINQ9Y5Q5 1042 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 SLC9B1P1A6NJY1 282 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 JUNDP17535 347 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 C14orf28Q4W4Y0 310 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 C18orf63Q68DL7 685 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 PARS2Q7L3T8 475 aaKnown RBP16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 BCDIN3DQ7Z5W3 292 aaKnown RBP16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 BPIFB2Q8N4F0 458 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 C12orf76Q8N812 135 aaPredicted RBP16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 DYNC2LI1Q8TCX1 351 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 MYADMQ96S97 322 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 TCEAL7Q9BRU2 100 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 BTBD2Q9BX70 525 aa16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 NDRG4Q9ULP0 352 aaKnown RBP16.03■□□□□ 0.16
PTP4A1-201ENST00000370651 ARRB2P32121 409 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF674Q2M3X9 581 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 NXNL2Q5VZ03 156 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF454Q8N9F8 522 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 OR13C2Q8NGS9 318 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 TANKQ92844 425 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 FYTTD1Q96QD9 318 aaKnown RBP16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 CLDND1Q9NY35 253 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 B3GALT1Q9Y5Z6 326 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 PSMB5P28074 263 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 SQSTM1Q13501 440 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 PDE7AQ13946 482 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 SLCO4C1Q6ZQN7 724 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 HTR3DQ70Z44 454 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 P4HA3Q7Z4N8 544 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 CCDC71LQ8N9Z2 235 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 LGALS14Q8TCE9 139 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 TMEM38AQ9H6F2 299 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 CXorf36Q9H7Y0 433 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 LRFN1Q9P244 771 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 FBXL2Q9UKC9 423 aa16.02■□□□□ 0.16
PTP4A1-201ENST00000370651 ACOD1A6NK06 481 aa16.02■□□□□ 0.15
PTP4A1-201ENST00000370651 I6L893 689 aaPredicted RBP16.02■□□□□ 0.15
PTP4A1-201ENST00000370651 RAB3AP20336 220 aa16.02■□□□□ 0.15
PTP4A1-201ENST00000370651 NKX6-1P78426 367 aaPredicted RBP16.02■□□□□ 0.15
PTP4A1-201ENST00000370651 LDLRAD1Q5T700 205 aa16.02■□□□□ 0.15
PTP4A1-201ENST00000370651 SIAH3Q8IW03 269 aa16.02■□□□□ 0.15
PTP4A1-201ENST00000370651 ABHD4Q8TB40 342 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms