RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TFPTP0C1Z6 253 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 UBTFL6P0CB48 400 aaPredicted RBP18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 EPXP11678 715 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 ETFAP13804 333 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 ME2P23368 584 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 SELENBP1Q13228 472 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 SLC2A7Q6PXP3 512 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 CMIPQ8IY22 773 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 RFWD2Q8NHY2 731 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 AURKBQ96GD4 344 aaPredicted RBP18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 GMPPAQ96IJ6 420 aaPredicted RBP18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 SRXN1Q9BYN0 137 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 PLSCR4Q9NRQ2 329 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 SLC25A37Q9NYZ2 338 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 A0A096LPI6 279 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 TRBV5-3A0A0A0MS03 114 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 TUBAL3A6NHL2 446 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 A6NNC1 897 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 PGCP20142 388 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 SFTPDP35247 375 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 CARD18P57730 90 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 ZNF239Q16600 458 aaKnown RBP18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 TMEM176BQ3YBM2 270 aaPredicted RBP18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 PRR14LQ5THK1 2151 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 HMGN2P46Q86SG4 172 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 TMCO5AQ8N6Q1 288 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 CNEP1R1Q8N9A8 125 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 LINC01560Q8TB33 94 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 RNF128Q8TEB7 428 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 SLC38A5Q8WUX1 472 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 CNOT9Q92600 299 aaKnown RBP18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 CCDC106Q9BWC9 280 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 OPN3Q9H1Y3 402 aaPredicted RBP18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 GLRX2Q9NS18 164 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 RASSF1Q9NS23 344 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 DNAJB12Q9NXW2 375 aaKnown RBP18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 ITGB1BP2Q9UKP3 347 aa18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 MCTS1Q9ULC4 181 aaKnown RBP18.36■□□□□ 0.53
SMNDC1-201ENST00000369592 GJE1A6NN92 205 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 STX1BP61266 288 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 SIRPAP78324 504 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 FAM27E3Q08E93 113 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 PDSS1Q5T2R2 415 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 PLEKHM3Q6ZWE6 761 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 ZNF610Q8N9Z0 462 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 OR6K3Q8NGY3 331 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 CPNE4Q96A23 557 aaPredicted RBP18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 DACH2Q96NX9 599 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 SLAMF8Q9P0V8 285 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 ING1Q9UK53 422 aaPredicted RBP18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 MTORP42345 2549 aa18.35■□□□□ 0.53
SMNDC1-201ENST00000369592 FAAHO00519 579 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 NR2F1P10589 423 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 CCKARP32238 428 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 CD79BP40259 229 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 CCR4P51679 360 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 DSTNP60981 165 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 HPCAP84074 193 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 RGNQ15493 299 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 PAGE3Q5JUK9 113 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 TMEM234Q8WY98 164 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 SPDL1Q96EA4 605 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 ELOVL5Q9NYP7 299 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 P2RX2Q9UBL9 471 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 CHST2Q9Y4C5 530 aa18.34■□□□□ 0.53
SMNDC1-201ENST00000369592 CLIC1O00299 241 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 CYP7B1O75881 506 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 GOSR1O95249 250 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 SYNGR4O95473 234 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 DBIP07108 87 aaKnown RBP18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 CPA2P48052 419 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 RAC3P60763 192 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 FADDQ13158 208 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 SQLEQ14534 574 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 TESK1Q15569 626 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 C6orf10Q5SRN2 563 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 C3orf33Q6P1S2 294 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 ADGRG3Q86Y34 549 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 ROBO4Q8WZ75 1007 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 GPATCH1Q9BRR8 931 aaKnown RBP18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 RSPO3Q9BXY4 272 aaPredicted RBP18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 GP6Q9HCN6 339 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 BCL2L10Q9HD36 194 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 THUMPD1Q9NXG2 353 aaKnown RBP18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 CCDC167Q9P0B6 97 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 PRDM4Q9UKN5 801 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 CLEC4AQ9UMR7 237 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 TESMINQ9Y4I5 508 aa18.33■□□□□ 0.52
SMNDC1-201ENST00000369592 CDHR4A6H8M9 788 aa18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 SMNDC1O75940 238 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 ANP32DO95626 131 aa18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 NUDT7P0C024 238 aa18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 AGTR1P30556 359 aa18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 APOBEC1P41238 236 aaKnown RBP18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 CRATP43155 626 aa18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 MERTKQ12866 999 aa18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 MRPL2Q5T653 305 aaKnown RBP18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 PRAMEF8Q5VWM4 474 aa18.32■□□□□ 0.52
SMNDC1-201ENST00000369592 PRAMEF7Q5VXH5 474 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms