RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 FAHD1Q6P587 224 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 BRICD5Q6PL45 260 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 USP51Q70EK9 711 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 PLPP5Q8NEB5 264 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 OR6T1Q8NGN1 323 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 OR52P1PQ8NH57 321 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 PHF10Q8WUB8 498 aaKnown RBP9.11□□□□□ -0.95
TPM3-210ENST00000368530 CTHRC1Q96CG8 243 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 ALPK1Q96QP1 1244 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 SDF2Q99470 211 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 FEVQ99581 238 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 TRIM45Q9H8W5 580 aaPredicted RBP9.11□□□□□ -0.95
TPM3-210ENST00000368530 CLK4Q9HAZ1 481 aaKnown RBP9.11□□□□□ -0.95
TPM3-210ENST00000368530 CACYBPQ9HB71 228 aaKnown RBP9.11□□□□□ -0.95
TPM3-210ENST00000368530 RLIMQ9NVW2 624 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 ERVK-19Q9WJR5 959 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 ZNF443Q9Y2A4 671 aaPredicted RBP9.11□□□□□ -0.95
TPM3-210ENST00000368530 DTX4Q9Y2E6 619 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 SLC9A8Q9Y2E8 581 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 GPR55Q9Y2T6 319 aaPredicted RBP9.11□□□□□ -0.95
TPM3-210ENST00000368530 CLDN16Q9Y5I7 305 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 HRH3Q9Y5N1 445 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 DSPPQ9NZW4 1301 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 TRBV4-1A0A0J9YWV2 114 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 LOC100130705A0A1B0GUX0 176 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CLDN24A6NM45 220 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 C17orf105B2RV13 164 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 NPIPA5E9PKD4 350 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 H3BNH8 94 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 BCKDKO14874 412 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 TPST2O60704 377 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 LGI1O95970 557 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 SP1P08047 785 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 POU2F1P14859 743 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 GSSP48637 474 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CASP6P55212 293 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CDH15P55291 814 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 POU6F2P78424 691 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 HOXC5Q00444 222 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 HSF1Q00613 529 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ALDH6A1Q02252 535 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 PIN1Q13526 163 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZNHIT3Q15649 155 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 NPTX1Q15818 432 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 MEP1AQ16819 746 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 RFX4Q33E94 735 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 EXOSC6Q5RKV6 272 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 SLC25A25Q6KCM7 469 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZNF836Q6ZNA1 936 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 GALNTL5Q7Z4T8 443 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 PEX5LQ8IYB4 626 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 C8orf59Q8N0T1 100 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 CLIP4Q8N3C7 705 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 PIK3C3Q8NEB9 887 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ELP5Q8TE02 316 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 GTPBP3Q969Y2 492 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 UTP23Q9BRU9 249 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZNF696Q9H7X3 374 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 MTHFD2LQ9H903 347 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 NMNAT1Q9HAN9 279 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 DUSP22Q9NRW4 184 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 C19orf25Q9UFG5 118 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 NPIPA1Q9UND3 350 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 A6NHS1 94 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 E9PLN8 166 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 PRKNO60260 465 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 STX11O75558 287 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 UGT2B17O75795 530 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 H1F0P07305 194 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 IL7RP16871 459 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 IGFBP2P18065 325 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CDH2P19022 906 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 ELK4P28324 431 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 EPHA2P29317 976 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 LIMS1P48059 325 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CLK3P49761 638 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 EMDP50402 254 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 SLC26A5P58743 744 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 SERTAD2Q14140 314 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 EXT1Q16394 746 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZCCHC12Q6PEW1 402 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 PAPD4Q6PIY7 484 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 DHRS4L2Q6PKH6 230 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZAR1Q86SH2 424 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 TSPYL5Q86VY4 417 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 ARMC10Q8N2F6 343 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZNF619Q8N2I2 560 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZNF321PQ8N8H1 164 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CHDHQ8NE62 594 aaPredicted RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 OR4N2Q8NGD1 307 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 STACQ99469 402 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 ARHGDIGQ99819 225 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 NIPSNAP1Q9BPW8 284 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 VKORC1Q9BQB6 163 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 FNDC11Q9BVV2 318 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 MRPS26Q9BYN8 205 aaKnown RBP9.1□□□□□ -0.95
TPM3-210ENST00000368530 ZNF350Q9GZX5 532 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 MCCC2Q9HCC0 563 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 TMCC3Q9ULS5 477 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms