RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NFKBIDQ8NI38 313 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 FNDC9Q8TBE3 224 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 ELAC2Q9BQ52 826 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 ACER3Q9NUN7 267 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 ARMCX1Q9P291 453 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 CORO2BQ9UQ03 480 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 CDHR4A6H8M9 788 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 SLC22A20A6NK97 555 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 FXYD1O00168 92 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 TNFSF11O14788 317 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 THBS1P07996 1170 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 ME2P23368 584 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 SFTPDP35247 375 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 EIF1AXP47813 144 aaKnown RBP20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 CDK6Q00534 326 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 PON3Q15166 354 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 LIN52Q52LA3 116 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 PLEKHM3Q6ZWE6 761 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 SPATA21Q7Z572 469 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 SNX32Q86XE0 403 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 PTOV1Q86YD1 416 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 GCNT2Q8N0V5 402 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 CLIP4Q8N3C7 705 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 BBS10Q8TAM1 723 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 INTS12Q96CB8 462 aaKnown RBP20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 KLHL15Q96M94 604 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 ZFP3Q96NJ6 502 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 SLC39A3Q9BRY0 314 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 ENKD1Q9H0I2 346 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 ZNF175Q9Y473 711 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 CELSR2Q9HCU4 2923 aa20.14■□□□□ 0.81
ECHDC1-203ENST00000368291 LOC100653049A0A140TA62 436 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 DVL2O14641 736 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 SLC22A2O15244 555 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 CXCL13O43927 109 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 KRT34O76011 436 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 AQP8O94778 261 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 IL18BPO95998 194 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 PABPC4LP0CB38 370 aaKnown RBP20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 ETS2P15036 469 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 IGFBP2P18065 325 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 SELENBP1Q13228 472 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 TRMT5Q32P41 509 aaKnown RBP20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 COQ5Q5HYK3 327 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 RNF220Q5VTB9 566 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 REP15Q6BDI9 236 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 LSRQ86X29 649 aaPredicted RBP20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 OR2V1Q8NHB1 315 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 TMEM234Q8WY98 164 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 CCDC106Q9BWC9 280 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 COQ10BQ9H8M1 238 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 CAPN7Q9Y6W3 813 aa20.13■□□□□ 0.81
ECHDC1-203ENST00000368291 GMNCA6NCL1 334 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 C5orf58C9J3I9 102 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 ACAA2P42765 397 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 SLC6A8P48029 635 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 IDH2P48735 452 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 EPS8Q12929 822 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 MAPRE2Q15555 327 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 SGCBQ16585 318 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 TMEM176BQ3YBM2 270 aaPredicted RBP20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 HBMQ6B0K9 141 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 NANOGP8Q6NSW7 305 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 REEP3Q6NUK4 255 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 P4HA3Q7Z4N8 544 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 ZNF563Q8TA94 476 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 SPATA9Q9BWV2 254 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 KAT8Q9H7Z6 458 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 NANOGQ9H9S0 305 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 RNF122Q9H9V4 155 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 IFT52Q9Y366 437 aa20.12■□□□□ 0.81
ECHDC1-203ENST00000368291 BBIP1A8MTZ0 92 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 FAAHO00519 579 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 MRASO14807 208 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 SNX3O60493 162 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 TNFSF13O75888 250 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 GKN3PP0CG01 181 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 OPRM1P35372 400 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 GZMMP51124 257 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 GNGT1P63211 74 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 MERTKQ12866 999 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 SCARB2Q14108 478 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 LARS2Q15031 903 aaKnown RBP20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 NET1Q7Z628 596 aaPredicted RBP20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 ATP6V1C2Q8NEY4 427 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 OSTF1Q92882 214 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 LRRC58Q96CX6 371 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 FAM107BQ9H098 131 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 CTPS2Q9NRF8 586 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 JKAMPQ9P055 326 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 ZNF232Q9UNY5 417 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 UNC79Q9P2D8 2635 aa20.11■□□□□ 0.81
ECHDC1-203ENST00000368291 A0A1W2PNV4 684 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 CFAP73A6NFT4 308 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 CYLC2Q14093 348 aaPredicted RBP20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 GUSBP1Q15486 140 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 MMEL1Q495T6 779 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 ZNF311Q5JNZ3 666 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 C3orf33Q6P1S2 294 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 GRINAQ7Z429 371 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms