RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 CASC3O15234 703 aaKnown RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 IFNA2P01563 188 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 GK3PQ14409 553 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 NIPAL3Q6P499 406 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ADGRG5Q8IZF4 528 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 NUDT8Q8WV74 236 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF649Q9BS31 505 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 PLSCR5A0PG75 271 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 FAM155AB1AL88 458 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 CACNG3O60359 315 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 DNASE1P24855 282 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 CTHP32929 405 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 MMP12P39900 470 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 PLEKHN1Q494U1 663 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 KIAA1211LQ6NV74 962 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 CCBE1Q6UXH8 406 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 CLEC14AQ86T13 490 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 MMP21Q8N119 569 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ARL14Q8N4G2 192 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 DHRS4Q9BTZ2 278 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 MMP28Q9H239 520 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 FOLH1BQ9HBA9 442 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF337Q9Y3M9 751 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 AP1M2Q9Y6Q5 423 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 TIAM2Q8IVF5 1701 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 TMEM265A0A087WTH1 108 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ABLIM3O94929 683 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 AQP2P41181 271 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 HAGHLQ6PII5 290 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 PAPD5Q8NDF8 572 aaKnown RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 WDR83Q9BRX9 315 aaKnown RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 OR10A5Q9H207 317 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 OR10A2Q9H208 303 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 FGF21Q9NSA1 209 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 HSFX1Q9UBD0 423 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 PTGS2P35354 604 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 VASH1Q7L8A9 365 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 SLC15A4Q8N697 577 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 BCL7CQ8WUZ0 217 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 NRG4Q8WWG1 115 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 CACNG6Q9BXT2 260 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ARNT2Q9HBZ2 717 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 TACR3P29371 465 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 BCL6P41182 706 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 CAV3P56539 151 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 VEZF1Q14119 521 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 GSG1LQ6UXU4 331 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 GPR149Q86SP6 731 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 METTL4Q8N3J2 472 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 OR4D6Q8NGJ1 314 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 C1QTNF2Q9BXJ5 285 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ACOT13Q9NPJ3 140 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 KLHL13Q9P2N7 655 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 MAB21L2Q9Y586 359 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 C4AP0C0L4 1744 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF749O43361 778 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 AP1G1O43747 822 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 CREBL2O60519 120 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-207ENST00000368226 C7P10643 843 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF44P15621 663 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 SMN1Q16637 294 aaKnown RBP12.03□□□□□ -0.48
PTPRK-207ENST00000368226 COX20Q5RI15 118 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ACBD4Q8NC06 268 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 CPT1CQ8TCG5 803 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 GTF2H4Q92759 462 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 C12orf49Q9H741 205 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF696Q9H7X3 374 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 SACM1LQ9NTJ5 587 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 RLIMQ9NVW2 624 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 OR2T1O43869 369 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ARSBP15848 533 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 YPEL5P62699 121 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ACSM3Q53FZ2 586 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 CNIH2Q6PI25 160 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 GPR148Q8TDV2 347 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ZC3HAV1LQ96H79 300 aaKnown RBP12.03□□□□□ -0.48
PTPRK-207ENST00000368226 UTP23Q9BRU9 249 aaKnown RBP12.03□□□□□ -0.48
PTPRK-207ENST00000368226 PLCH1Q4KWH8 1693 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 CBX7O95931 251 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 SSR4P51571 173 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 PPP5CP53041 499 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 TSSK4Q6SA08 328 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF322Q6U7Q0 402 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-207ENST00000368226 KIF18BQ86Y91 864 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 LILRB2Q8N423 598 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 BOKQ9UMX3 212 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-207ENST00000368226 NUDT1P36639 197 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 INHBCP55103 352 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 MED25Q71SY5 747 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 RTL10Q7L3V2 364 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 HDAC8Q9BY41 377 aa12.03□□□□□ -0.48
PTPRK-207ENST00000368226 PAQR5Q9NXK6 330 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-207ENST00000368226 HSPE1-MOB4S4R3N1 261 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms