RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ST8SIA1Q92185 356 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 ZNF524Q96C55 264 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 C14orf79Q96F83 325 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 ZNF845Q96IR2 970 aaPredicted RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 KLHL15Q96M94 604 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 QRSL1Q9H0R6 528 aaKnown RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 PIGMQ9H3S5 423 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 CCDC134Q9H6E4 229 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 RNF122Q9H9V4 155 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 TIGARQ9NQ88 270 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 EXOSC3Q9NQT5 275 aaKnown RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 SERINC1Q9NRX5 453 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 SLC25A37Q9NYZ2 338 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 P2RX2Q9UBL9 471 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 A0A1W2PNV4 684 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 CLDN24A6NM45 220 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 EVPLLA8MZ36 301 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 NR5A2O00482 541 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 CXCL13O43927 109 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 TNFSF13O75888 250 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 SYNGR4O95473 234 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 VIMP08670 466 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 PABPC4LP0CB38 370 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 BMP2P12643 396 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 CD1EP15812 388 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 PPIBP23284 216 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 FKBP2P26885 142 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 SSTR2P30874 369 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 UQCRC1P31930 480 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 RYKP34925 604 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 MDH1P40925 334 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 APOBEC1P41238 236 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 KIR2DL2P43627 348 aaPredicted RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 SLC6A8P48029 635 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 CCR4P51679 360 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 FOXF1Q12946 379 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 ZSWIM7Q19AV6 140 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 TMEM176BQ3YBM2 270 aaPredicted RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 HBMQ6B0K9 141 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 DLEU7Q6UYE1 221 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 GDF7Q7Z4P5 450 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 KIF18BQ86Y91 864 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 PEX5LQ8IYB4 626 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 GCNT2Q8N0V5 402 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 OR52P1PQ8NH57 321 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 ZNF563Q8TA94 476 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 WDR60Q8WVS4 1066 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 CNOT9Q92600 299 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 STARD4Q96DR4 205 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 TMEM120AQ9BXJ8 343 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 TRIM8Q9BZR9 551 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 ZNF385DQ9H6B1 395 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 BCL2L10Q9HD36 194 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 GLRX2Q9NS18 164 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 ACER3Q9NUN7 267 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 MRGBPQ9NV56 204 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 KCNN3Q9UGI6 736 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 LEF1Q9UJU2 399 aaPredicted RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 MCTS1Q9ULC4 181 aaKnown RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 IFT52Q9Y366 437 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 CRYBG3Q68DQ2 2970 aa8.84□□□□□ -0.99
CD48-202ENST00000368046 NUP214P35658 2090 aaPredicted RBP8.84□□□□□ -0.99
CD48-202ENST00000368046 PHF3Q92576 2039 aaKnown RBP8.83□□□□□ -1
CD48-202ENST00000368046 FREM3P0C091 2139 aa8.83□□□□□ -1
CD48-202ENST00000368046 TRBV5-3A0A0A0MS03 114 aa8.83□□□□□ -1
CD48-202ENST00000368046 EEF1E1-BLOC1S5C9J1V9 151 aa8.83□□□□□ -1
CD48-202ENST00000368046 TNFSF11O14788 317 aa8.83□□□□□ -1
CD48-202ENST00000368046 MSTNO14793 375 aa8.83□□□□□ -1
CD48-202ENST00000368046 EEF1E1O43324 174 aaKnown RBP8.83□□□□□ -1
CD48-202ENST00000368046 BCAS1O75363 584 aaPredicted RBP8.83□□□□□ -1
CD48-202ENST00000368046 AQP8O94778 261 aa8.83□□□□□ -1
CD48-202ENST00000368046 BCHEP06276 602 aa8.83□□□□□ -1
CD48-202ENST00000368046 FCGR2AP12318 317 aa8.83□□□□□ -1
CD48-202ENST00000368046 NID1P14543 1247 aa8.83□□□□□ -1
CD48-202ENST00000368046 GPX2P18283 190 aa8.83□□□□□ -1
CD48-202ENST00000368046 RPS4Y1P22090 263 aaKnown RBP8.83□□□□□ -1
CD48-202ENST00000368046 SFTPDP35247 375 aa8.83□□□□□ -1
CD48-202ENST00000368046 KIR2DL3P43628 341 aa8.83□□□□□ -1
CD48-202ENST00000368046 CLK1P49759 484 aaKnown RBP8.83□□□□□ -1
CD48-202ENST00000368046 RAC3P60763 192 aa8.83□□□□□ -1
CD48-202ENST00000368046 MERTKQ12866 999 aa8.83□□□□□ -1
CD48-202ENST00000368046 RUNDC3AQ59EK9 446 aa8.83□□□□□ -1
CD48-202ENST00000368046 PRAMEF8Q5VWM4 474 aa8.83□□□□□ -1
CD48-202ENST00000368046 PRAMEF7Q5VXH5 474 aa8.83□□□□□ -1
CD48-202ENST00000368046 PLEKHM3Q6ZWE6 761 aa8.83□□□□□ -1
CD48-202ENST00000368046 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
CD48-202ENST00000368046 HMGN2P46Q86SG4 172 aa8.83□□□□□ -1
CD48-202ENST00000368046 LUZP2Q86TE4 346 aa8.83□□□□□ -1
CD48-202ENST00000368046 MSRB3Q8IXL7 192 aa8.83□□□□□ -1
CD48-202ENST00000368046 ZNF440Q8IYI8 595 aa8.83□□□□□ -1
CD48-202ENST00000368046 DPP10Q8N608 796 aa8.83□□□□□ -1
CD48-202ENST00000368046 CNEP1R1Q8N9A8 125 aa8.83□□□□□ -1
CD48-202ENST00000368046 ATP6V1C2Q8NEY4 427 aa8.83□□□□□ -1
CD48-202ENST00000368046 CPNE4Q96A23 557 aaPredicted RBP8.83□□□□□ -1
CD48-202ENST00000368046 TMEM19Q96HH6 336 aa8.83□□□□□ -1
CD48-202ENST00000368046 REXO5Q96IC2 774 aaKnown RBP8.83□□□□□ -1
CD48-202ENST00000368046 GMPPAQ96IJ6 420 aaPredicted RBP8.83□□□□□ -1
CD48-202ENST00000368046 RBM24Q9BX46 236 aaKnown RBP8.83□□□□□ -1
CD48-202ENST00000368046 ARMC7Q9H6L4 198 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms