RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TMEM8BA6NDV4 472 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 TRIM64A6NGJ6 449 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 BET1O15155 118 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 SLC16A6O15403 523 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 CLPXO76031 633 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 IGHEP01854 428 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 GNAO1P09471 354 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 CBLP22681 906 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 NR0B1P51843 470 aaKnown RBP11.09□□□□□ -0.63
USF1-203ENST00000368021 SLC26A5P58743 744 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 PLAURQ03405 335 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 KCNAB2Q13303 367 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 CDONQ4KMG0 1287 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 KLHL26Q53HC5 615 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ENTPD8Q5MY95 495 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 SLC5A8Q8N695 610 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 TMCO5AQ8N6Q1 288 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ZNF555Q8NEP9 628 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 OR4C3Q8NH37 302 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 HPS1Q92902 700 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 LMF1Q96S06 567 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 MBOAT4Q96T53 435 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 MCHR1Q99705 422 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 UQCC2Q9BRT2 126 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 SLA2Q9H6Q3 261 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ENOPH1Q9UHY7 261 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 SLC35A3Q9Y2D2 325 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 POFUT2Q9Y2G5 429 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 SDK2Q58EX2 2172 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 KLK10O43240 276 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 TSPAN2O60636 221 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 CYP7B1O75881 506 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 BCL10O95999 233 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 ADAP00813 363 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 NGFRP08138 427 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 NAT2P11245 290 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
USF1-203ENST00000368021 CCNA2P20248 432 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 TBXA2RP21731 343 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 ITPKBP27987 946 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 ABCD3P28288 659 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 KRT20P35900 424 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 FOLR3P41439 243 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 NRG3P56975 720 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 TRAM2Q15035 370 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 ZIK1Q3SY52 487 aaPredicted RBP11.08□□□□□ -0.64
USF1-203ENST00000368021 IGF2-ASQ6U949 168 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 PLEKHM3Q6ZWE6 761 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 PARP8Q8N3A8 854 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 ZNF614Q8N883 585 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 OR9Q2Q8NGE9 314 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 OR5L2Q8NGL0 311 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 C8orf44Q96CB5 159 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 MESP1Q9BRJ9 268 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 GABARAPL3Q9BY60 117 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 ZNF700Q9H0M5 742 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 GPN2Q9H9Y4 310 aaPredicted RBP11.08□□□□□ -0.64
USF1-203ENST00000368021 ZNF556Q9HAH1 456 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 DNAJB12Q9NXW2 375 aaKnown RBP11.08□□□□□ -0.64
USF1-203ENST00000368021 BOD1L1Q8NFC6 3051 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 PKD1L2Q7Z442 2459 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 ITPR1Q14643 2758 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 CACNA1BQ00975 2339 aa11.08□□□□□ -0.64
USF1-203ENST00000368021 LOC100130705A0A1B0GUX0 176 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SERINC4A6NH21 518 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 CPSF4LA6NMK7 179 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 RRP8O43159 456 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 ABCB7O75027 752 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 MITFO75030 526 aaPredicted RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 UGT2B11O75310 529 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SEC24DO94855 1032 aaPredicted RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 MMP11P24347 488 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 IL12BP29460 328 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SERPINB10P48595 397 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 PNLIPRP2P54317 469 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 PLCXD2Q0VAA5 305 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 IL18R1Q13478 541 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 PCOLCEQ15113 449 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SEC23BQ15437 767 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 PODNL1Q6PEZ8 512 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 ZNF550Q7Z398 422 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 TIPARPQ7Z3E1 657 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 ZNF440Q8IYI8 595 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 AQP11Q8NBQ7 271 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 ZNF248Q8NDW4 579 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 FAM71CQ8NEG0 241 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 KCNE4Q8WWG9 221 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 CNOT9Q92600 299 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 SLC38A4Q969I6 547 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 ZNF559Q9BR84 538 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 GON7Q9BXV9 100 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 DGCR6LQ9BY27 220 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 NUP50Q9UKX7 468 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 MGAT4BQ9UQ53 548 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 HS3ST3B1Q9Y662 390 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SMG1Q96Q15 3661 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 IGHV1-45A0A0A0MS14 117 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 TRBV11-1A0A0K0K1C0 115 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms