RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ZNF254O75437 659 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 C4BPAP04003 597 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TEAD1P28347 426 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR3A2P47893 321 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TEX26Q8N6G2 289 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 CA10Q9NS85 328 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ZDHHC2Q9UIJ5 367 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 KRBA1A5PL33 1030 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TP53I11O14683 189 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 HNRNPLP14866 589 aaKnown RBP eCLIP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GLRA1P23415 457 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 YWHAQP27348 245 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SNRPD2P62316 118 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MTFR2Q6P444 385 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR5B3Q8NH48 314 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RAB37Q96AX2 223 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ACOX2Q99424 681 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 CUEDC1Q9NWM3 386 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SLC37A3Q8NCC5 494 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NTMT1Q9BV86 223 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 CCDC167Q9P0B6 97 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ACAA1P09110 424 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RNF149Q8NC42 400 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR52N2Q8NGI0 321 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR56B1Q8NGI3 324 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 DRGXA6NNA5 263 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OSMP13725 252 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SIM1P81133 766 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SLC22A16Q86VW1 577 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TP63Q9H3D4 680 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SDHAF3Q9NRP4 125 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 C7orf71A4D174 169 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 AADACL4Q5VUY2 407 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 KHSRPQ92945 711 aaKnown RBP eCLIP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FBXO4Q9UKT5 387 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GLUD1P00367 558 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MEOX2P50222 304 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 VAMP5O95183 116 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SPNP16150 400 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OLIG2Q13516 323 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TIGITQ495A1 244 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SERPINA9Q86WD7 417 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GTF3AQ92664 365 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TFGQ92734 400 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OPALINQ96PE5 141 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 PEBP4Q96S96 227 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SFXN3Q9BWM7 321 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FBXO6Q9NRD1 293 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FBXO34Q9NWN3 711 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 BTG4Q9NY30 223 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1W2PPK0 400 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 C7orf66A4D0T2 115 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 KIAA1324LA8MWY0 1029 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 hCG_2039718K7EN88 272 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 PLSCR1O15162 318 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 LRP3O75074 770 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 IL27RAQ6UWB1 636 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ACOT1Q86TX2 421 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR6K3Q8NGY3 331 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GLYATL1Q969I3 302 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 HSPBAP1Q96EW2 488 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RAB40CQ96S21 281 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RNF146Q9NTX7 359 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NDOR1Q9UHB4 597 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 K7EQM0 130 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NDUFB10O96000 172 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 APOA2P02652 100 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 VTNP04004 478 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MUC1P15941 1255 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GNRHRP30968 328 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 HBA1P69905 142 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF613Q6PF04 617 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 IRF7Q92985 503 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 HDAC8Q9BY41 377 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR51M1Q9H341 326 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MARCH2Q9P0N8 246 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 UPK1AO00322 258 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 PRSS3P35030 304 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NOVP48745 357 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 CLEC6AQ6EIG7 209 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 THAP4Q8WY91 577 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 PER3P56645 1201 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM236Q5W0B7 351 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SLC16A14Q7RTX9 510 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ARFGAP1Q8N6T3 406 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MGLLQ99685 303 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MARVELD1Q9BSK0 173 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 LAMTOR3Q9UHA4 124 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SLC15A5A6NIM6 579 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SYNGR4O95473 234 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RACK1P63244 317 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 PRDX4Q13162 271 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM201Q5SNT2 666 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ABI3BPQ7Z7G0 1075 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FNDC9Q8TBE3 224 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 KIF12Q96FN5 646 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GSTO2Q9H4Y5 243 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 BCL2L10Q9HD36 194 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RIMS3Q9UJD0 308 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms