RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ACOT13Q9NPJ3 140 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 EMC9Q9Y3B6 208 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 MKRN2OSH3BPM6 223 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 VNN2O95498 520 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 TPTEP56180 551 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 SLC26A5P58743 744 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 RAB15P59190 212 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 CDK10Q15131 360 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 LTB4RQ15722 352 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 VWA2Q5GFL6 755 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 FRMPD2BQ6IN97 320 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 PODNL1Q6PEZ8 512 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 FAM83HQ6ZRV2 1179 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 MINDY2Q8NBR6 621 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF223Q9UK11 482 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ZMYND11Q15326 602 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 OR1Q1Q15612 314 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ENTPD8Q5MY95 495 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 BCL2L15Q5TBC7 163 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 AGBL4Q5VU57 503 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 TMEM53Q6P2H8 277 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 LCORQ96JN0 433 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 AMDHD1Q96NU7 426 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 N4BP2Q86UW6 1770 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 FAM230AA0A1W2PPH8 454 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 OTOL1A6NHN0 477 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 PRRG2O14669 202 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 CTSLP07711 333 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 POU3F1Q03052 451 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF750Q32MQ0 723 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 CHTF18Q8WVB6 975 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 MAELQ96JY0 434 aaKnown RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 HDHD5Q9BXW7 423 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF226Q9NYT6 803 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 SLC33A1O00400 549 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 KIAA0513O60268 411 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 MTRF1O75570 445 aaKnown RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 HTR3BO95264 441 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 BDH1Q02338 343 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 EIF2B1Q14232 305 aaKnown RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 MRPL2Q5T653 305 aaKnown RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 PIP5KL1Q5T9C9 394 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 SDR9C7Q8NEX9 313 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 PRDM9Q9NQV7 894 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ASIC5Q9NY37 505 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 EMC3Q9P0I2 261 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 OR14J1Q9UGF5 321 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 NOSIPQ9Y314 301 aaKnown RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 METTL12A8MUP2 240 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 PRKNO60260 465 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 CD1CP29017 333 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 GRK5P34947 590 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 SLC6A12P48065 614 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 CCDC36Q8IYA8 594 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 SLC38A5Q8WUX1 472 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 GCDHQ92947 438 aaPredicted RBP10.79□□□□□ -0.68
SYNE1-204ENST00000367248 SLC46A1Q96NT5 459 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 C19orf43Q9BQ61 176 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 MED11Q9P086 117 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 MGAT4AQ9UM21 535 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 ABCG2Q9UNQ0 655 aa10.79□□□□□ -0.68
SYNE1-204ENST00000367248 DPP4P27487 766 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 NKAIN1Q4KMZ8 207 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CCDC74BQ96LY2 380 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 GLIPR2Q9H4G4 154 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 PAK1IP1Q9NWT1 392 aaPredicted RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 MED16Q9Y2X0 877 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 DDX60LQ5H9U9 1706 aaKnown RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SERINC4A6NH21 518 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF850A8MQ14 1090 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 ALOX12BO75342 701 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SLC22A10Q63ZE4 541 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 ABHD12BQ7Z5M8 362 aaPredicted RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 KIAA1958Q8N8K9 716 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SENP5Q96HI0 755 aaPredicted RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SAP130Q9H0E3 1048 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 C14orf166Q9Y224 244 aaKnown RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 MYH4Q9Y623 1939 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 DBHP09172 617 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CCL7P80098 99 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 KEAP1Q14145 624 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 NIPAL3Q6P499 406 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 STX12Q86Y82 276 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 HAVCR2Q8TDQ0 301 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 ULBP2Q9BZM5 246 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 OR52A5Q9H2C5 316 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 TUBB1Q9H4B7 451 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 ADAMTS7Q9UKP4 1686 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CD8B2A6NJW9 211 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 KDM4EB2RXH2 506 aaPredicted RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CEACAM5P06731 702 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CD3GP09693 182 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 FBXO45P0C2W1 286 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CD8BP10966 210 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 GIPRP48546 466 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 EPHA5P54756 1037 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms