RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PLAC8L1A1L4L8 177 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 GTPBP10A4D1E9 387 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 LRIT2A6NDA9 550 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ANKDD1BA6NHY2 528 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 SAGE2PA6NJ88 616 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 C9JVG2 144 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 PEX7O00628 323 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 XPO1O14980 1071 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 CHUKO15111 745 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ZSCAN12O43309 604 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 FKBP6O75344 327 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 GCM2O75603 506 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 RHOBTB1O94844 696 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 PFN1P07737 140 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 CTSGP08311 255 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 KRT13P13646 458 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 POU2F1P14859 743 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 HPGDP15428 266 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 PSMA3P25788 255 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 NMT1P30419 496 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 EPHX2P34913 555 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 CSNK1EP49674 416 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 KPNA2P52292 529 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 CSE1LP55060 971 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 NAP1L1P55209 391 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 CHRNB3Q05901 458 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 RBPJQ06330 500 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 PLCXD2Q0VAA5 305 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ST3GAL3Q11203 375 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ASPHQ12797 758 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 KLF5Q13887 457 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 IRF3Q14653 427 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 RAB35Q15286 201 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 TWISTNBQ3B726 338 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 SLC39A12Q504Y0 691 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 COA6Q5JTJ3 125 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 C1orf100Q5SVJ3 147 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ARMC4Q5T2S8 1044 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 STUMQ69YW2 141 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ITPRIPL1Q6GPH6 555 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 CTRB2Q6GPI1 263 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 MZT2BQ6NZ67 158 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 HSDL2Q6YN16 418 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 SIGLEC15Q6ZMC9 328 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 H2AFVQ71UI9 128 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 IFNEQ86WN2 208 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 EGFL6Q8IUX8 553 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 MFSD6LQ8IWD5 586 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 SGPP2Q8IWX5 399 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 PYROXD2Q8N2H3 581 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 LRRC43Q8N309 656 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 OR6C4Q8NGE1 309 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 LILRB4Q8NHJ6 448 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 SETD6Q8TBK2 473 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 PRPF31Q8WWY3 499 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 TMCO6Q96DC7 493 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 COG3Q96JB2 828 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 RMDN2Q96LZ7 410 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 C7orf26Q96N11 449 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 HIST1H4GQ99525 98 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 TSG101Q99816 390 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 TBL1YQ9BQ87 522 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 SEC22CQ9BRL7 303 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 RNF126Q9BV68 326 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 CLMPQ9H6B4 373 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 C12orf10Q9HB07 376 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 FAM212BQ9NTI7 297 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 GIMAP4Q9NUV9 329 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 TECRQ9NZ01 308 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ADD3Q9UEY8 706 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 MRTO4Q9UKD2 239 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ERVK-19Q9WJR5 959 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 YARS2Q9Y2Z4 477 aaKnown RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 ZANQ9Y493 2812 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 LTBP2Q14767 1821 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 UBR5O95071 2799 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 DOCK8Q8NF50 2099 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 USH2AO75445 5202 aa-0.6□□□□□ -2.51
RNU6-54P-201ENST00000365563 LRP2P98164 4655 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 SH3TC1Q8TE82 1336 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 C2orf16Q68DN1 1984 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 CELSR1Q9NYQ6 3014 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 DLG5Q8TDM6 1919 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 IGKV2D-26A0A0A0MRZ7 120 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 A0A0U1RQG5 324 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 TCRBV21S2A2A0A5A6 115 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 PRSS37A4D1T9 235 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 BTNL10A8MVZ5 291 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 E9PBE3 544 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 LY6LH3BQJ8 138 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 SYNGR2O43760 224 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 GLCEO94923 617 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 CXCL14O95715 111 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 LALBAP00709 142 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 IGKV2D-40P01614 121 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 ALPPP05187 535 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 CENPBP07199 599 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 GPX1P07203 203 aa-0.61□□□□□ -2.51
RNU6-54P-201ENST00000365563 ABCB1P08183 1280 aaPredicted RBP-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms