RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 KCNC4Q03721 635 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 SPPL2CQ8IUH8 684 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 CHERPQ8IWX8 916 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 GPR32P1Q8NGA4 272 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 NSMCE2Q96MF7 247 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 PRDM14Q9GZV8 571 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 ADAM19Q9H013 955 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 SLC6A15Q9H2J7 730 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 EGFL7Q9UHF1 273 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 LIPGQ9Y5X9 500 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 POLEQ07864 2286 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 TMEM229AB2RXF0 380 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 ARPC2O15144 300 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 GMFGO60234 142 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 SLC19A2O60779 497 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 ADAM11O75078 769 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 GKN3PP0CG01 181 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 POLR2HP52434 150 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF136P52737 540 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 CRYZQ08257 329 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 SELENBP1Q13228 472 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 TOMM34Q15785 309 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 WLSQ5T9L3 541 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 LCN8Q6JVE9 175 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 DHFR2Q86XF0 187 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 FAM156AQ8NDB6 213 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 FAM57AQ8TBR7 257 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 DNAJA4Q8WW22 397 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 GEMIN6Q8WXD5 167 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 TIMP4Q99727 224 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 UGT2B28Q9BY64 529 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 CADM1Q9BY67 442 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 TMEM27Q9HBJ8 222 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 RALYQ9UKM9 306 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 PACSIN3Q9UKS6 424 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 ACAD8Q9UKU7 415 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 RPH3AQ9Y2J0 694 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF337Q9Y3M9 751 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 SHANK1Q9Y566 2161 aa12.5□□□□□ -0.41
NSMCE1-201ENST00000361439 NBASA2RRP1 2371 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 AHRRA9YTQ3 701 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 AP3D1O14617 1153 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 PRRG2O14669 202 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF208O43345 1280 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 WDR1O75083 606 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 WISP2O76076 250 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 STSP08842 583 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 PNMTP11086 282 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 GABRA1P14867 456 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 NCK1P16333 377 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ABOP16442 354 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF708P17019 499 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 POU3F2P20265 443 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 LHX2P50458 406 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 CASP6P55212 293 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 FOXF1Q12946 379 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 C3orf33Q6P1S2 294 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF613Q6PF04 617 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ESPNLQ6ZVH7 1005 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 PLEKHM3Q6ZWE6 761 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ASRGL1Q7L266 308 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 COMTD1Q86VU5 262 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ULK2Q8IYT8 1036 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 OR6T1Q8NGN1 323 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 POC1BQ8TC44 478 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 TRIM15Q9C019 465 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 PAQR5Q9NXK6 330 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 SPRR3Q9UBC9 169 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 RPS6KB2Q9UBS0 482 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 CHRNA9Q9UGM1 479 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 SLC6A5Q9Y345 797 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 SH3GLB1Q9Y371 365 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 DNAJC13O75165 2243 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 SVILO95425 2214 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF407Q9C0G0 2248 aa12.49□□□□□ -0.41
NSMCE1-201ENST00000361439 NPIPA2E9PIF3 369 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 NPIPA3F8WFD2 350 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 PDE5AO76074 875 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF682O95780 498 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 IFNW1P05000 195 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 PRG2P13727 222 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 IFNA8P32881 189 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 MSX2P35548 267 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 CLDN18P56856 261 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 HSF1Q00613 529 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 MERTKQ12866 999 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 IFI44LQ53G44 452 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 PDSS1Q5T2R2 415 aa12.48□□□□□ -0.41
NSMCE1-201ENST00000361439 FKBP9P1Q75LS8 142 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms