RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 OVCH1Q7RTY7 1134 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 DAZLQ92904 295 aaKnown RBP12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 ART5Q96L15 291 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SDHCQ99643 169 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 VN1R1Q9GZP7 353 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 OR10A5Q9H207 317 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SLC38A1Q9H2H9 487 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 MTHFD2LQ9H903 347 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 FOLH1BQ9HBA9 442 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SNTG1Q9NSN8 517 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 TVP23BQ9NYZ1 205 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 CLEC2DQ9UHP7 191 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SLC13A4Q9UKG4 626 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 DIMT1Q9UNQ2 313 aaKnown RBP12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 IQCMA0A1B0GVH7 501 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 A0A1W2PNU3 283 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 TCRBV16S1A1N1A0A5B0 115 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 A8MUA0 341 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 B4E171 279 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 MEN1O00255 615 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 STX11O75558 287 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 ONECUT2O95948 504 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 IL1AP01583 271 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 HEXBP07686 556 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 GSTM3P21266 225 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 TSPAN7P41732 249 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 EMDP50402 254 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 CHRNEQ04844 493 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 DCST2Q5T1A1 773 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 STPG1Q5TH74 334 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 PLPP5Q8NEB5 264 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 SLC7A13Q8TCU3 470 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 ZNF486Q96H40 463 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 SENP5Q96HI0 755 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 SDF2Q99470 211 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 FUZQ9BT04 418 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 LMF2Q9BU23 707 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 C14orf119Q9NWQ9 140 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 GPN3Q9UHW5 284 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 GVINP1Q7Z2Y8 2422 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 TEX51A0A1B0GUA7 166 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 TLX2O43763 284 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 NKX2-2O95096 273 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 ZIC2O95409 532 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 ZNF24P17028 368 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 ZNF311Q5JNZ3 666 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 CDCP2Q5VXM1 449 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 DHRS13Q6UX07 377 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 HMGN2P46Q86SG4 172 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 PEX5LQ8IYB4 626 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 UBQLNLQ8IYU4 475 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 OR14A16Q8NHC5 309 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 PTPMT1Q8WUK0 201 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 METTL21AQ8WXB1 218 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 NR4A3Q92570 626 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 PINK1Q9BXM7 581 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 A4GNTQ9UNA3 340 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 DTX4Q9Y2E6 619 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 PCDHGA1Q9Y5H4 931 aa12.13□□□□□ -0.47
SQSTM1-201ENST00000360718 SEMA7AO75326 666 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 CLPSP04118 112 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 MYL12AP19105 171 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 MAP3K8P41279 467 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 GIPRP48546 466 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 SMSP52788 366 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 PSPHP78330 225 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 SCN1BQ07699 218 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 PIN1Q13526 163 aaPredicted RBP12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 GINS1Q14691 196 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 ISXQ2M1V0 245 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 FAM69BQ5VUD6 431 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 PODNL1Q6PEZ8 512 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 RAB43Q86YS6 212 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 RBM45Q8IUH3 476 aaKnown RBP12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 PHC2Q8IXK0 858 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 CLDN22Q8N7P3 220 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 CELF2-AS1Q8N7Q2 184 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 ZNF321PQ8N8H1 164 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 ASB15Q8WXK1 588 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 PMM1Q92871 262 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 BARHL1Q9BZE3 327 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 ULBP3Q9BZM4 244 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 OR8D2Q9GZM6 311 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 Q9N2J8 555 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 COPS7AQ9UBW8 275 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 LOXL2Q9Y4K0 774 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 FCMRO60667 390 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 TPST2O60704 377 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 LGI1O95970 557 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 TSPAN19P0C672 248 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 IFNGR2P38484 337 aa12.12□□□□□ -0.47
SQSTM1-201ENST00000360718 LARS2Q15031 903 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms