RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GMPPBQ9Y5P6 360 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 AHCTF1Q8WYP5 2266 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 PCSK5Q92824 1860 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ERVH48-1M5A8F1 160 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 FADS1O60427 444 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 OR2J2O76002 312 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 LYPD3O95274 346 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 TNFAIP8O95379 198 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 CLIC3O95833 236 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ANGPTL1O95841 491 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 THY1P04216 161 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 CELA2AP08217 269 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 LINGO3P0C6S8 592 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 OSMP13725 252 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 POU2F1P14859 743 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 RYKP34925 604 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 FBXW4P57775 412 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ESRRGP62508 458 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ZNF117Q03924 483 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 COX10Q12887 443 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 IL10RAQ13651 578 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ALG10BQ5I7T1 473 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ZNF691Q5VV52 312 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 DESI1Q6ICB0 168 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ULK3Q6PHR2 472 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 OPN5Q6U736 354 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 LYPD8Q6UX82 237 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 MBOAT2Q6ZWT7 520 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 THAP5Q7Z6K1 395 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 MARCH3Q86UD3 253 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 RNF113BQ8IZP6 322 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 GRHL3Q8TE85 626 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 DNAJA4Q8WW22 397 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 SPACA9Q96E40 222 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 RASL10BQ96S79 203 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 CCNL2Q96S94 520 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 APOL4Q9BPW4 351 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 PRSS27Q9BQR3 290 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 ING2Q9H160 280 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 HHATLQ9HCP6 504 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 P4HTMQ9NXG6 502 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 CARD8Q9Y2G2 431 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 YARS2Q9Y2Z4 477 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 HSPE1-MOB4S4R3N1 261 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 EML6Q6ZMW3 1958 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 MPDZO75970 2070 aa12.66□□□□□ -0.38
PDLIM5-203ENST00000359265 DOCK10Q96BY6 2186 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 NBPF19A0A087WUL8 3843 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 OIP5O43482 229 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 HCRTR2O43614 444 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 ZNF354AO60765 605 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 ADAM11O75078 769 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 ITGA10O75578 1167 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 LYNP07948 512 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 F8A1P23610 371 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 POLR2IP36954 125 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 RBM34P42696 430 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 NUP107P57740 925 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 CXADRP78310 365 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 RPP38P78345 283 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 ALDH6A1Q02252 535 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 CHAF1BQ13112 559 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 NTRK2Q16620 822 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 WBP2NLQ6ICG8 309 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 ZER1Q7Z7L7 766 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 DND1Q8IYX4 353 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 OR5M3Q8NGP4 307 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 TMEM255BQ8WV15 326 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 TMEM239Q8WW34 195 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 ASB15Q8WXK1 588 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 HRASLS5Q96KN8 279 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 MUS81Q96NY9 551 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 NODALQ96S42 347 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 IL17BQ9UHF5 180 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 NDRG4Q9ULP0 352 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 MED31Q9Y3C7 131 aa12.65□□□□□ -0.38
PDLIM5-203ENST00000359265 PCNX3Q9H6A9 2034 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 E9PQ18 207 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 TP53I11O14683 189 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 PIP5K1CO60331 668 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 OR6B1O95007 311 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 SERPINA7P05543 415 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 PGCP20142 388 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 SOX3P41225 446 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 OMPP47874 163 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 GSSP48637 474 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 IDH2P48735 452 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 SSR4P51571 173 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 CRISP1P54107 249 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 SUMO3P55854 103 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 MLF1P58340 268 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 TLE3Q04726 772 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 TSPAN31Q12999 210 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 RAPSNQ13702 412 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 CBFBQ13951 182 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 TTC33Q6PID6 262 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms