RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CDH20Q9HBT6 801 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 OBP2AQ9NY56 170 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 AK6Q9Y3D8 172 aaKnown RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 SHANK3Q9BYB0 1731 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 AP1G1O43747 822 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 IRF2P14316 349 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF14P17017 642 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF28P17035 718 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 GM2AP17900 193 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 PKLRP30613 574 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 IDUAP35475 653 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 CAMLGP49069 296 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 TAS2R19P59542 299 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 BLOC1S1P78537 153 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 CTBSQ01459 385 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 MAP4K2Q12851 820 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 RPE65Q16518 533 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 DEFB110Q30KQ9 67 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 MANEAQ5SRI9 462 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 MRPL41Q8IXM3 137 aaKnown RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 PELI3Q8N2H9 469 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 OR14A16Q8NHC5 309 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 ZFP90Q8TF47 636 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 HDAC8Q9BY41 377 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 KLKB1P03952 638 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 OR8U9P0C7N5 309 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 FOLR3P41439 243 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 PCBD1P61457 104 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 REEP5Q00765 189 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 TNFRSF17Q02223 184 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 FAM180BQ6P0A1 224 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 OPN5Q6U736 354 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 RSPO2Q6UXX9 243 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 Q6ZSR9 355 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 LIX1LQ8IVB5 337 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 STEAP2Q8NFT2 490 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 C19orf43Q9BQ61 176 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 C20orf27Q9GZN8 174 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 A4GALTQ9NPC4 353 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 ACOT8O14734 319 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 SERPINA5P05154 406 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 GPX2P18283 190 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 HOXA9P31269 272 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 TNFSF8P32971 234 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 GK2Q14410 553 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 ACTBL2Q562R1 376 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 DUS1LQ6P1R4 473 aaKnown RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 SBSNQ6UWP8 590 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 SDR9C7Q8NEX9 313 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 OR51T1Q8NGJ9 327 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 NEURL3Q96EH8 262 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 SFXN2Q96NB2 322 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 LMF1Q96S06 567 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 MARCH5Q9NX47 278 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 GLTPQ9NZD2 209 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 PSORS1C1Q9UIG5 152 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 MYO10Q9HD67 2058 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 HHLA1C9JL84 531 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SULT2B1O00204 365 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ADAM23O75077 832 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ZFAND5O76080 213 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 MPIG6BO95866 241 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 F11P03951 625 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ARSBP15848 533 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 DRD5P21918 477 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 PRKAR1BP31321 381 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 CSNK1A1P48729 337 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 RNF144AP50876 292 aaPredicted RBP10.98□□□□□ -0.65
COL9A1-202ENST00000357250 NPAP1Q9NZP6 1156 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 IL20RAQ9UHF4 553 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF281Q9Y2X9 895 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 MEIOCA2RUB1 952 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SGK494L7N484 410 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 MEN1O00255 615 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SLCO2B1O94956 709 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 LCATP04180 440 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 FURINP09958 794 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 CTGFP29279 349 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 PLK5Q496M5 336 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 PIP5KL1Q5T9C9 394 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 OR13F1Q8NGS4 319 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ELMOD3Q96FG2 381 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 HHIPL1Q96JK4 782 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SULT4A1Q9BR01 284 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 RBM24Q9BX46 236 aaKnown RBP10.98□□□□□ -0.65
COL9A1-202ENST00000357250 MS4A8Q9BY19 250 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 POLR2AP24928 1970 aaKnown RBP10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SMCO3A2RU48 225 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 A6NCN8 305 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 METTL15A6NJ78 407 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SEC14L5O43304 696 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 OR2T7P0C7T2 308 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 JUNBP17275 347 aaPredicted RBP10.98□□□□□ -0.65
COL9A1-202ENST00000357250 NR4A2P43354 598 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 RAP2BP61225 183 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF616Q08AN1 781 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 FGFBP1Q14512 234 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 MBTPS1Q14703 1052 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SYPL1Q16563 259 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms