RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 YTHDF1Q9BYJ9 559 aaKnown RBP16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 METTL7AQ9H8H3 244 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 KLRF1Q9NZS2 232 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 MYRFQ9Y2G1 1151 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 GMPPBQ9Y5P6 360 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 SPTBN4Q9H254 2564 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 MPDZO75970 2070 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 TP53I11O14683 189 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 PIP5K1CO60331 668 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 PRKAR1AP10644 381 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 ITGA3P26006 1051 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 SLC6A8P48029 635 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 P2RX1P51575 399 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 C17orf67Q0P5P2 114 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 RAPSNQ13702 412 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 MEP1AQ16819 746 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 COL28A1Q2UY09 1125 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 ALG10BQ5I7T1 473 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 TMEM154Q6P9G4 183 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 TTC33Q6PID6 262 aaPredicted RBP16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 LINC00114Q6XXX2 140 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 PRICKLE2Q7Z3G6 844 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 MEX3DQ86XN8 651 aaKnown RBP16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 DND1Q8IYX4 353 aaKnown RBP16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 BEST3Q8N1M1 668 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 B4GALNT2Q8NHY0 566 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 C3orf49Q96BT1 292 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 NTNG2Q96CW9 530 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 GPA33Q99795 319 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 APOL4Q9BPW4 351 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 LHPPQ9H008 270 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 ANKRD10Q9NXR5 420 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 REV1Q9UBZ9 1251 aa16.54■□□□□ 0.24
SMARCD3-202ENST00000356800 ARGFXA6NJG6 315 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 EIF4E1BA6NMX2 242 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 CCL3P10147 92 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 OSMP13725 252 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 TPD52P55327 224 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 COPZ1P61923 177 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 WBP2NLQ6ICG8 309 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 TMEM81Q6P7N7 255 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 ULK3Q6PHR2 472 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 MBOAT2Q6ZWT7 520 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 RRM2BQ7LG56 351 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 RNF113BQ8IZP6 322 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 CLEC1AQ8NC01 280 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 RNF217Q8TC41 542 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 GPR119Q8TDV5 335 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 PAQR8Q8TEZ7 354 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 THAP4Q8WY91 577 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 SECISBP2Q96T21 854 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF426Q9BUY5 554 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 ING2Q9H160 280 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 PROK2Q9HC23 129 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 RYDENQ9NUL5 291 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 HPF1Q9NWY4 346 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 RPS6KB2Q9UBS0 482 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 WIF1Q9Y5W5 379 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 ZFHX4Q86UP3 3567 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 TRIM64A6NGJ6 449 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 TLX3O43711 291 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 WISP1O95388 367 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 GSTM3P21266 225 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 ITPKBP27987 946 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 OMPP47874 163 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 INPP5JQ15735 1006 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 KCTD21Q4G0X4 260 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 PRAMEF20Q5VT98 475 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 MDGA2Q7Z553 956 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF227Q86WZ6 799 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 NRMQ8IXM6 262 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF786Q8N393 782 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 PIGXQ8TBF5 258 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 GNPDA2Q8TDQ7 276 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 TMEM239Q8WW34 195 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 MPP4Q96JB8 637 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 BATF3Q9NR55 127 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 STMN3Q9NZ72 180 aa16.53■□□□□ 0.24
SMARCD3-202ENST00000356800 IGLV3-32A0A0A0MS00 114 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 CHMP24386 653 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 GGT2P36268 569 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 HLCSP50747 726 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 CRISP1P54107 249 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 ALDH6A1Q02252 535 aaKnown RBP16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 CD47Q08722 323 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 SNTA1Q13424 505 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 CBFBQ13951 182 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 ATG4DQ86TL0 474 aaPredicted RBP16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 CCDC71Q8IV32 467 aaPredicted RBP16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 PFN4Q8NHR9 129 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 DNAJA4Q8WW22 397 aaPredicted RBP16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 FGF11Q92914 225 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 FRMD6Q96NE9 622 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 ADAM19Q9H013 955 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 CPNE5Q9HCH3 593 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 KRCC1Q9NPI7 259 aaPredicted RBP16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 MED11Q9P086 117 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 PPP4R1LQ9P1A2 415 aa16.52■□□□□ 0.23
SMARCD3-202ENST00000356800 PIEZO1Q92508 2521 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 A0A087WUJ7 227 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms