RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 TOMM34Q15785 309 aaPredicted RBP18.3■□□□□ 0.52
CHRD-203ENST00000356534 CNEP1R1Q8N9A8 125 aa18.3■□□□□ 0.52
CHRD-203ENST00000356534 NPAS1Q99742 590 aa18.3■□□□□ 0.52
CHRD-203ENST00000356534 ZNF559Q9BR84 538 aa18.3■□□□□ 0.52
CHRD-203ENST00000356534 CCDC134Q9H6E4 229 aa18.3■□□□□ 0.52
CHRD-203ENST00000356534 EMC9Q9Y3B6 208 aa18.3■□□□□ 0.52
CHRD-203ENST00000356534 GMEB1Q9Y692 573 aa18.3■□□□□ 0.52
CHRD-203ENST00000356534 A0A0G2JPF8 293 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 A0A0J9YW62 118 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 HNRNPCL2B2RXH8 293 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 HNRNPCL3B7ZW38 293 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 ANGPT2O15123 496 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 CXCL13O43927 109 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 HNRNPCL1O60812 293 aaKnown RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 PLGP00747 810 aaPredicted RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 C1QCP02747 245 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 VIMP08670 466 aaKnown RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 HNRNPCL4P0DMR1 293 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 HOXB9P17482 250 aaPredicted RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 HTR3AP46098 478 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 AGFG1P52594 562 aaKnown RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 DLX5P56178 289 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 CARD18P57730 90 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 TLE4Q04727 773 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 TMEM19Q96HH6 336 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 GMPPAQ96IJ6 420 aaPredicted RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 KLHDC3Q9BQ90 382 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 RBM24Q9BX46 236 aaKnown RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 TMEM120AQ9BXJ8 343 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 QRSL1Q9H0R6 528 aaKnown RBP18.29■□□□□ 0.52
CHRD-203ENST00000356534 ZNF385DQ9H6B1 395 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 A4GALTQ9NPC4 353 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 FGFR1OP2Q9NVK5 253 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 IFT52Q9Y366 437 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 CREBBPQ92793 2442 aa18.29■□□□□ 0.52
CHRD-203ENST00000356534 C5orf58C9J3I9 102 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 FAAHO00519 579 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 TNFSF13O75888 250 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 THBS1P07996 1170 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 TFPTP0C1Z6 253 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 PRF1P14222 555 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 APOBEC1P41238 236 aaKnown RBP18.28■□□□□ 0.52
CHRD-203ENST00000356534 KIR2DL3P43628 341 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 PCYT1AP49585 367 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 CTBP2P56545 445 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 SESN3P58005 492 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 MERTKQ12866 999 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 ZNF239Q16600 458 aaKnown RBP18.28■□□□□ 0.52
CHRD-203ENST00000356534 MRPL2Q5T653 305 aaKnown RBP18.28■□□□□ 0.52
CHRD-203ENST00000356534 RNF220Q5VTB9 566 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 PLXDC2Q6UX71 529 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 GRINAQ7Z429 371 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 ZNF295-AS1Q8N0V1 137 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 BBS10Q8TAM1 723 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 SLC38A5Q8WUX1 472 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 OSTF1Q92882 214 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 MCCC2Q9HCC0 563 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 FANCFQ9NPI8 374 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 SLC52A3Q9NQ40 469 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 DNAJB12Q9NXW2 375 aaKnown RBP18.28■□□□□ 0.52
CHRD-203ENST00000356534 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.28■□□□□ 0.52
CHRD-203ENST00000356534 ZNF232Q9UNY5 417 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 NDUFAF1Q9Y375 327 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 APCP25054 2843 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 FREM1Q5H8C1 2179 aa18.28■□□□□ 0.52
CHRD-203ENST00000356534 ANKRD17O75179 2603 aaKnown RBP18.28■□□□□ 0.52
CHRD-203ENST00000356534 SMNDC1O75940 238 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■□□□□ 9.7
CHRD-203ENST00000356534 GOSR1O95249 250 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 CD8BP10966 210 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 ARFIP2P53365 341 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 RNPS1Q15287 305 aaKnown RBP18.27■□□□□ 0.52
CHRD-203ENST00000356534 TMEM176BQ3YBM2 270 aaPredicted RBP18.27■□□□□ 0.52
CHRD-203ENST00000356534 PAGE3Q5JUK9 113 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 GCNT6Q5T4J0 391 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 PLEKHM3Q6ZWE6 761 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 FAM214BQ7L5A3 538 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 DHDDSQ86SQ9 333 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 LUZP2Q86TE4 346 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 DPP10Q8N608 796 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 OR6K3Q8NGY3 331 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 OR52P1PQ8NH57 321 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 FAM222BQ8WU58 562 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 ZG16BQ96DA0 208 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 TACO1Q9BSH4 297 aaKnown RBP18.27■□□□□ 0.52
CHRD-203ENST00000356534 GP6Q9HCN6 339 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 BCL2L10Q9HD36 194 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 SLC25A37Q9NYZ2 338 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 PROCRQ9UNN8 238 aa18.27■□□□□ 0.52
CHRD-203ENST00000356534 CFAP73A6NFT4 308 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 A8MXE2 369 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 SS18L1O75177 396 aaPredicted RBP18.26■□□□□ 0.51
CHRD-203ENST00000356534 AQP8O94778 261 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 IL11P20809 199 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 RYKP34925 604 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 MAP2K6P52564 334 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 RAC3P60763 192 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 CSNK2A1P68400 391 aaPredicted RBP18.26■□□□□ 0.51
CHRD-203ENST00000356534 SIRPAP78324 504 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 GUSBP1Q15486 140 aa18.26■□□□□ 0.51
CHRD-203ENST00000356534 MAPRE2Q15555 327 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms