RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 FBXW5Q969U6 566 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 PGLYRP3Q96LB9 341 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 CD180Q99467 661 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 DPEP2Q9H4A9 486 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 SDHAF2Q9NX18 166 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 SCP2D1Q9UJQ7 156 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 ABT1Q9ULW3 272 aaKnown RBP9.4□□□□□ -0.91
PTPRA-203ENST00000356147 WDR45Q9Y484 360 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 AUP1Q9Y679 476 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 OBSL1O75147 1896 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 PRRT4C9JH25 899 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ARPC5O15511 151 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 HMGN1P05114 100 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 SBK2P0C263 348 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 EPXP11678 715 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 CSNK2A2P19784 350 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ATP5A1P25705 553 aaKnown RBP9.39□□□□□ -0.91
PTPRA-203ENST00000356147 HTR2AP28223 471 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 PRR5P85299 388 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 FOXK2Q01167 660 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ACSM1Q08AH1 577 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 GARNL3Q5VVW2 1013 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 FIGNL1Q6PIW4 674 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ARSKQ6UWY0 536 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 APOOLQ6UXV4 268 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 BTN2A1Q7KYR7 527 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 SLC44A3Q8N4M1 653 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 KREMEN2Q8NCW0 462 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 OR7G2Q8NG99 324 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 OR5K2Q8NHB8 316 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ST8SIA4Q92187 359 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 KLHL15Q96M94 604 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 WDR26Q9H7D7 661 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ADAP2Q9NPF8 381 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 KCNMB2Q9Y691 235 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF860A6NHJ4 632 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 KLF4O43474 513 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 KHDRBS3O75525 346 aaKnown RBP9.39□□□□□ -0.91
PTPRA-203ENST00000356147 UBL3O95164 117 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 NFATC1O95644 943 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 INHAP05111 366 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ADH7P40394 386 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ST8SIA6P61647 398 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 BTN3A2P78410 334 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 KLF9Q13886 244 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-203ENST00000356147 KRT33BQ14525 404 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 DECR1Q16698 335 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 FRRS1Q6ZNA5 592 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 SDR9C7Q8NEX9 313 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 PPP1R16AQ96I34 528 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 LRRC3BQ96PB8 259 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ERMAPQ96PL5 475 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-203ENST00000356147 OR1F2PQ96R84 312 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 DMRTA2Q96SC8 542 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 MENTQ9BUN1 341 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 TMEM74BQ9NUR3 256 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF346Q9UL40 294 aaKnown RBP9.39□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF443Q9Y2A4 671 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-203ENST00000356147 THSD7BQ9C0I4 1608 aa9.39□□□□□ -0.91
PTPRA-203ENST00000356147 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 TRBV23OR9-2A0A075B6M9 112 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 L7N2F9 121 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 EMC8O43402 210 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 FMO6PO60774 539 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PEX14O75381 377 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 SLC35G4P0C7Q5 338 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 NAGAP17050 411 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 DCTDP32321 178 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 WASP42768 502 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MLF2Q15773 248 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 RPE65Q16518 533 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 FNDC3BQ53EP0 1204 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 GPAT4Q86UL3 456 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 GPALPP1Q8IXQ4 340 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 OR2A1Q8NGT9 310 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 OR4K13Q8NH42 304 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 OR56B4Q8NH76 319 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 ZCCHC10Q8TBK6 192 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 ST8SIA2Q92186 375 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 HGDQ93099 445 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MS4A6EQ96DS6 147 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 AHCYL2Q96HN2 611 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PRSS27Q9BQR3 290 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 C12orf10Q9HB07 376 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 ADGRL4Q9HBW9 690 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 HRASLSQ9HDD0 168 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 WASH6PQ9NQA3 447 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PRDM7Q9NQW5 492 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 POT1Q9NUX5 634 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 SPHK1Q9NYA1 384 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MRPL39Q9NYK5 338 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MDC1Q14676 2089 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 BHLHE40O14503 412 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 FLRT2O43155 660 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PLPP2O43688 288 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 LPLP06858 475 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 ADRB3P13945 408 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 GDI2P50395 445 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 CCR9P51686 369 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms