RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HOXB1P14653 301 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 PSMB5P28074 263 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 PTGER1P34995 402 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 OMPP47874 163 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 GK2Q14410 553 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 FAAP20Q6NZ36 180 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 GSG1LQ6UXU4 331 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 GLDNQ6ZMI3 551 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 LINGO2Q7L985 606 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 EIF4E3Q8N5X7 224 aaKnown RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 OR10H4Q8NGA5 316 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 YIPF4Q9BSR8 244 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 NOX3Q9HBY0 568 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 EXOSC3Q9NQT5 275 aaKnown RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 TM7SF3Q9NS93 570 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 SEMA4GQ9NTN9 838 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 SAGE1Q9NXZ1 904 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 FEZF1A0PJY2 475 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 PPM1DO15297 605 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 HYAL3O43820 417 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 C6P13671 934 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 PPP3CBP16298 524 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 IFNGR2P38484 337 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 FGL2Q14314 439 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 PGGHGQ32M88 737 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 ACSM3Q53FZ2 586 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 IGSF11Q5DX21 431 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 PRAMEF14Q5SWL7 426 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 PRAMEF13Q5VWM6 474 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 CXXC5Q7LFL8 322 aaKnown RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 GRASPQ7Z6J2 395 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 C11orf96Q7Z7L8 435 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 RELL2Q8NC24 303 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 ARRDC3Q96B67 414 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 TMPRSS13Q9BYE2 586 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 SLC6A20Q9NP91 592 aa17.3■□□□□ 0.36
SCARF1-202ENST00000348987 ZNF275Q9NSD4 429 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-202ENST00000348987 FXYD6-FXYD2A0A087WZ82 144 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 A0A0G2JN53 185 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 GSTZ1O43708 216 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-202ENST00000348987 REM1O75628 298 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 PAPLNO95428 1278 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 DHCR24Q15392 516 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 TMEM44Q2T9K0 475 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 APOOLQ6UXV4 268 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 FAM129CQ86XR2 697 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 LURAP1LQ8IV03 231 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 KCT2Q8NC54 265 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 OR5T2Q8NGG2 359 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 SMAP2Q8WU79 429 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-202ENST00000348987 OSTF1Q92882 214 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 FXYD6Q9H0Q3 95 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 NEUROD4Q9HD90 331 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 SLC23A2Q9UGH3 650 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 TAC3Q9UHF0 121 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 MRTO4Q9UKD2 239 aaKnown RBP17.29■□□□□ 0.36
SCARF1-202ENST00000348987 LRRK1Q38SD2 2015 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
SCARF1-202ENST00000348987 OR2A4O95047 310 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 SPDEFO95238 335 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 CISD3P0C7P0 127 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 IFNGR1P15260 489 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 ERVK-25P63136 954 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 FAM69AQ5T7M9 428 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 PXKQ7Z7A4 578 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 AMER3Q8N944 861 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 OR5M9Q8NGP3 310 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 NUS1Q96E22 293 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 ELP4Q96EB1 424 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 OR2A7Q96R45 310 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 OR1F2PQ96R84 312 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 TEX12Q9BXU0 123 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 ESRP2Q9H6T0 727 aaKnown RBP17.29■□□□□ 0.36
SCARF1-202ENST00000348987 IL20Q9NYY1 176 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 ACTR10Q9NZ32 417 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 PTPRSQ13332 1948 aa17.29■□□□□ 0.36
SCARF1-202ENST00000348987 LTBP2Q14767 1821 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 MTCL1Q9Y4B5 1905 aaKnown RBP17.28■□□□□ 0.36
SCARF1-202ENST00000348987 MPTX1A8MV57 137 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 H7C2Y5 167 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 PLPP2O43688 288 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 HPP00738 406 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 IGF2P01344 180 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 HIST1H2ABP04908 130 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 CHRM4P08173 479 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 EPXP11678 715 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 CPN1P15169 458 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 PPP2R1BP30154 601 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 PRKAG1P54619 331 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 ZNF660Q6AZW8 331 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-202ENST00000348987 HIST3H2AQ7L7L0 130 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 MCATQ8IVS2 390 aaKnown RBP17.28■□□□□ 0.36
SCARF1-202ENST00000348987 NKAIN4Q8IVV8 208 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 NAXDQ8IW45 347 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 NRSN1Q8IZ57 195 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 OR52B4Q8NGK2 314 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 BBS10Q8TAM1 723 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 FANK1Q8TC84 345 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 HIST1H2ACQ93077 130 aa17.28■□□□□ 0.36
SCARF1-202ENST00000348987 JAM3Q9BX67 310 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms