RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 C1GALT1C1Q96EU7 318 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 GNRHR2Q96P88 292 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 PRSS27Q9BQR3 290 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 ADAM19Q9H013 955 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 RASSF4Q9H2L5 321 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 KLHL1Q9NR64 748 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 PCDHGB6Q9Y5F9 930 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 CACNA1GO43497 2377 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 TRBV4-1A0A0J9YWV2 114 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 PDGFAP04085 211 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 FPR1P21462 350 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 KCNAB2Q13303 367 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 TRAM2Q15035 370 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 SHQ1Q6PI26 577 aaKnown RBP24.59■■□□□ 1.53
SSBP4-202ENST00000348495 EPHX4Q8IUS5 362 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 ICA1LQ8NDH6 482 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 ZNF563Q8TA94 476 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 NRG4Q8WWG1 115 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 PTGES2Q9H7Z7 377 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 MED17Q9NVC6 651 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 TAS2R10Q9NYW0 307 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 OAZ3Q9UMX2 235 aa24.59■■□□□ 1.53
SSBP4-202ENST00000348495 CHP2O43745 196 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 PEX1O43933 1283 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 CDC40O60508 579 aaKnown RBP eCLIP24.58■■□□□ 1.53
SSBP4-202ENST00000348495 E2F6O75461 281 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 TRIP10Q15642 601 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 EXOC3L2Q2M3D2 409 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 ALG10BQ5I7T1 473 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 LINC00114Q6XXX2 140 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 GALNTL5Q7Z4T8 443 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 OR5K1Q8NHB7 308 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 ST8SIA1Q92185 356 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 NRBF2Q96F24 287 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 JSRP1Q96MG2 331 aaPredicted RBP24.58■■□□□ 1.53
SSBP4-202ENST00000348495 ZFP64Q9NPA5 681 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 STOML1Q9UBI4 398 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 RPS6KB2Q9UBS0 482 aa24.58■■□□□ 1.53
SSBP4-202ENST00000348495 TNRC6AQ8NDV7 1962 aaKnown RBP24.58■■□□□ 1.53
SSBP4-202ENST00000348495 CBR3O75828 277 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 PRKCAP17252 672 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 WDR88Q6ZMY6 472 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 NKAIN4Q8IVV8 208 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 ZADH2Q8N4Q0 377 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 TMEM178AQ8NBL3 297 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 SLC38A4Q969I6 547 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 ALPK1Q96QP1 1244 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 BARD1Q99728 777 aaKnown RBP24.58■■□□□ 1.52
SSBP4-202ENST00000348495 ZNF426Q9BUY5 554 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 BOKQ9UMX3 212 aaPredicted RBP24.58■■□□□ 1.52
SSBP4-202ENST00000348495 C15orf41Q9Y2V0 281 aa24.58■■□□□ 1.52
SSBP4-202ENST00000348495 TRAV17A0A0B4J275 112 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 SAC3D1A6NKF1 404 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 K7EM74 188 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 WISP1O95388 367 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 NTN1O95631 604 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 SEC23BQ15437 767 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 PLPPR5Q32ZL2 321 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 SLC25A53Q5H9E4 307 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 FGD3Q5JSP0 725 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 OGFRL1Q5TC84 451 aaPredicted RBP24.57■■□□□ 1.52
SSBP4-202ENST00000348495 ATG4DQ86TL0 474 aaPredicted RBP24.57■■□□□ 1.52
SSBP4-202ENST00000348495 HS3ST5Q8IZT8 346 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 SVOPLQ8N434 492 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 TMEM234Q8WY98 164 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 UBQLN3Q9H347 655 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 C12orf10Q9HB07 376 aa24.57■■□□□ 1.52
SSBP4-202ENST00000348495 MAGED1Q9Y5V3 778 aaPredicted RBP24.57■■□□□ 1.52
SSBP4-202ENST00000348495 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 KLRC4-KLRK1H3BQV0 150 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 GP1BBP13224 206 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 ZNF23P17027 643 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 PEX2P28328 305 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 LPCAT4Q643R3 524 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 PODNL1Q6PEZ8 512 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 ABHD17AQ96GS6 310 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 MPP4Q96JB8 637 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 CIB1Q99828 191 aa24.56■■□□□ 1.52
SSBP4-202ENST00000348495 A0A087WZY1 265 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 G3V2T6 193 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 TACR3P29371 465 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 GCKP35557 465 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 ZNF41P51814 821 aaPredicted RBP24.55■■□□□ 1.52
SSBP4-202ENST00000348495 DSCR4P56555 118 aaPredicted RBP24.55■■□□□ 1.52
SSBP4-202ENST00000348495 FOXD4Q12950 439 aaPredicted RBP24.55■■□□□ 1.52
SSBP4-202ENST00000348495 LAPTM4AQ15012 233 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 SNCBQ16143 134 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 DCST1Q5T197 706 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 GRINAQ7Z429 371 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 ZDHHC13Q8IUH4 622 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 ZFP62Q8NB50 900 aaPredicted RBP24.55■■□□□ 1.52
SSBP4-202ENST00000348495 NPAS1Q99742 590 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 VDAC3Q9Y277 283 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 A0A087WUJ7 227 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 A0A087WUU8 490 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 SH3PXD2BA1X283 911 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 RFPL3SP0C7P2 107 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 PTDSS1P48651 473 aaKnown RBP24.55■■□□□ 1.52
SSBP4-202ENST00000348495 MICAQ29983 383 aa24.55■■□□□ 1.52
SSBP4-202ENST00000348495 TBPL2Q6SJ96 375 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms