RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 POLE3Q9NRF9 147 aa11.86□□□□□ -0.51
CLCC1-202ENST00000348264 GLRX2Q9NS18 164 aa11.86□□□□□ -0.51
CLCC1-202ENST00000348264 NF1P21359 2839 aa11.86□□□□□ -0.51
CLCC1-202ENST00000348264 USF3Q68DE3 2245 aa11.86□□□□□ -0.51
CLCC1-202ENST00000348264 IGHV3-15A0A0B4J1V0 119 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 CCDC154A6NI56 674 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 CLDN24A6NM45 220 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 GJE1A6NN92 205 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 GSNP06396 782 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 THBDP07204 575 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 GUSBP08236 651 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 KLK2P20151 261 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
CLCC1-202ENST00000348264 SLC7A1P30825 629 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 PGM1P36871 562 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 SESN3P58005 492 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 CHRNEQ04844 493 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 DEFB113Q30KQ7 82 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 COX20Q5RI15 118 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 AP1ARQ63HQ0 302 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 C3orf33Q6P1S2 294 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 DNAJC14Q6Y2X3 702 aaPredicted RBP11.85□□□□□ -0.51
CLCC1-202ENST00000348264 STAC2Q6ZMT1 411 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 EIF3MQ7L2H7 374 aaKnown RBP11.85□□□□□ -0.51
CLCC1-202ENST00000348264 FCRLAQ7L513 359 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 ANKFN1Q8N957 763 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 PNPT1Q8TCS8 783 aaKnown RBP11.85□□□□□ -0.51
CLCC1-202ENST00000348264 ST8SIA1Q92185 356 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 PIK3IP1Q96FE7 263 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 OR52B2Q96RD2 323 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 PANX1Q96RD7 426 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 TIGARQ9NQ88 270 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 SLC6A13Q9NSD5 602 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 ZNF226Q9NYT6 803 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 KLHL13Q9P2N7 655 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 EDARQ9UNE0 448 aa11.85□□□□□ -0.51
CLCC1-202ENST00000348264 SLCO1B7G3V0H7 640 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 ADAM11O75078 769 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 CHRM4P08173 479 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 PABPC4LP0CB38 370 aaKnown RBP11.84□□□□□ -0.51
CLCC1-202ENST00000348264 IDO1P14902 403 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 CD53P19397 219 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 ENPP1P22413 925 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 HPCAP84074 193 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 RNPS1Q15287 305 aaKnown RBP11.84□□□□□ -0.51
CLCC1-202ENST00000348264 SYPL1Q16563 259 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 PDCD4Q53EL6 469 aaKnown RBP11.84□□□□□ -0.51
CLCC1-202ENST00000348264 GPAT3Q53EU6 434 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 TFAP2EQ6VUC0 442 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 NUFIP2Q7Z417 695 aaKnown RBP11.84□□□□□ -0.51
CLCC1-202ENST00000348264 TGIF2LYQ8IUE0 185 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 TUSC5Q8IXB3 177 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 TRIML2Q8N7C3 387 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 OIT3Q8WWZ8 545 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 ARL8AQ96BM9 186 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 REXO5Q96IC2 774 aaKnown RBP11.84□□□□□ -0.51
CLCC1-202ENST00000348264 ZBTB18Q99592 522 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 SLC35A3Q9Y2D2 325 aa11.84□□□□□ -0.51
CLCC1-202ENST00000348264 KLF11O14901 512 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 SMAD9O15198 467 aaKnown RBP11.83□□□□□ -0.52
CLCC1-202ENST00000348264 PGCP20142 388 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 RYKP34925 604 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 RAC3P60763 192 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 MERTKQ12866 999 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 TMEM201Q5SNT2 666 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 AGBL2Q5U5Z8 902 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 GTF2IRD2BQ6EKJ0 949 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 ZNF621Q6ZSS3 439 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 BEND4Q6ZU67 534 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 PLEKHM3Q6ZWE6 761 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 GTF2IRD2Q86UP8 949 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 STK32CQ86UX6 486 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 GLB1L3Q8NCI6 653 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-202ENST00000348264 OR9I1Q8NGQ6 314 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 PIWIL2Q8TC59 973 aaKnown RBP11.83□□□□□ -0.52
CLCC1-202ENST00000348264 ZNF75CPQ92670 426 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-202ENST00000348264 TRNT1Q96Q11 434 aaKnown RBP11.83□□□□□ -0.52
CLCC1-202ENST00000348264 OR5B2Q96R09 309 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 PSD2Q9BQI7 771 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 SDR39U1Q9NRG7 319 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-202ENST00000348264 ACER3Q9NUN7 267 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 ING1Q9UK53 422 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-202ENST00000348264 PLCE1Q9P212 2302 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 NAV3Q8IVL0 2385 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 TLN2Q9Y4G6 2542 aa11.83□□□□□ -0.52
CLCC1-202ENST00000348264 RFXANKO14593 260 aa11.82□□□□□ -0.52
CLCC1-202ENST00000348264 GCM2O75603 506 aaPredicted RBP11.82□□□□□ -0.52
CLCC1-202ENST00000348264 SLC22A3O75751 556 aa11.82□□□□□ -0.52
CLCC1-202ENST00000348264 PRKD3O94806 890 aa11.82□□□□□ -0.52
CLCC1-202ENST00000348264 IL6P05231 212 aa11.82□□□□□ -0.52
CLCC1-202ENST00000348264 CD99P14209 185 aa11.82□□□□□ -0.52
CLCC1-202ENST00000348264 PSMB1P20618 241 aaKnown RBP11.82□□□□□ -0.52
CLCC1-202ENST00000348264 RPS4Y1P22090 263 aaKnown RBP11.82□□□□□ -0.52
CLCC1-202ENST00000348264 EDNRAP25101 427 aa11.82□□□□□ -0.52
CLCC1-202ENST00000348264 MVDP53602 400 aa11.82□□□□□ -0.52
CLCC1-202ENST00000348264 ADAM8P78325 824 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms