RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SC5DO75845 299 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 OR5F1O95221 314 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 EPPINO95925 133 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 EGFP01133 1207 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 TFP02787 698 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 IL5P05113 134 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 FGF2P09038 288 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 PSMB1P20618 241 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 MAPK3P27361 379 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 ACADLP28330 430 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 CCR9P51686 369 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 SEC13P55735 322 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 MRPS10P82664 201 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 DBPQ10586 325 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 SMAD4Q13485 552 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 CEACAM19Q7Z692 300 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 ANKRD53Q8N9V6 530 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 ABHD4Q8TB40 342 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 BRIX1Q8TDN6 353 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 C15orf40Q8WUR7 153 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 ASB13Q8WXK3 278 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 FAM46AQ96IP4 442 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 AIF1LQ9BQI0 150 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 UTP23Q9BRU9 249 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 WDR26Q9H7D7 661 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 SLC22A31A6NKX4 558 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 C2CD4DB7Z1M9 353 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 SULT1B1O43704 296 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 ARL6IP5O75915 188 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 HOXC4P09017 264 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-202ENST00000347617 CD3GP09693 182 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 ICAM2P13598 275 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 HOXB2P14652 356 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 IFNGR1P15260 489 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 KELP23276 732 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 NTSP30990 170 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 NRG3P56975 720 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 DGCR2P98153 550 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 RPL6Q02878 288 aaKnown RBP14.72□□□□□ -0.05
HMGA1-202ENST00000347617 SGCGQ13326 291 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 TSTA3Q13630 321 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-202ENST00000347617 INSL4Q14641 139 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 RPL13AP3Q6NVV1 102 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 SLC30A6Q6NXT4 461 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 NIPAL3Q6P499 406 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 IL20RBQ6UXL0 311 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 MBOAT2Q6ZWT7 520 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 LRRTM4Q86VH4 590 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 COMTD1Q86VU5 262 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 AMZ2Q86W34 360 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 MMP21Q8N119 569 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 SIRT6Q8N6T7 355 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 OR56A1Q8NGH5 318 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 OR52H1Q8NGJ2 320 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 SLC2A12Q8TD20 617 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 PHYHIPQ92561 330 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 KAT2AQ92830 837 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 ELP4Q96EB1 424 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 PHPT1Q9NRX4 125 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-202ENST00000347617 SPATA2Q9UM82 520 aa14.72□□□□□ -0.05
HMGA1-202ENST00000347617 GSAPA4D1B5 854 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 AIPO00170 330 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 RP2O75695 350 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 RGS11O94810 467 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 OR2A4O95047 310 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 KLF8O95600 359 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 LDOC1O95751 146 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 CD1AP06126 327 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 HOXB1P14653 301 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 NFYAP23511 347 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 PDHA2P29803 388 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 CCR6P51684 374 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 ACTC1P68032 377 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 ACTA1P68133 377 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 FLI1Q01543 452 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 TUSC1Q2TAM9 212 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 UBE2NLQ5JXB2 153 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 CLEC12AQ5QGZ9 265 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 OVCH1Q7RTY7 1134 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 CPOQ8IVL8 374 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 KCT2Q8NC54 265 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 OR51G2Q8NGK0 314 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 MOSPD2Q8NHP6 518 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 PMEPA1Q969W9 287 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 EXOSC8Q96B26 276 aaKnown RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 OR2A7Q96R45 310 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 MRI1Q9BV20 369 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 SLC17A9Q9BYT1 436 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 BRD7Q9NPI1 651 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 HINT3Q9NQE9 182 aaKnown RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 ZCCHC3Q9NUD5 404 aaKnown RBP14.71□□□□□ -0.05
HMGA1-202ENST00000347617 SERGEFQ9UGK8 458 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 TRPM6Q9BX84 2022 aa14.71□□□□□ -0.05
HMGA1-202ENST00000347617 PRR23D1E9PI22 279 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 MBTPS2O43462 519 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 CHRM4P08173 479 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 NMBP08949 121 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 PRR23D2P0DMB1 279 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 PPP3CBP16298 524 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms