RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TMEM246Q9BRR3 403 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 OBP2BQ9NPH6 170 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 TAS2R10Q9NYW0 307 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 SLC25A37Q9NYZ2 338 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CORINQ9Y5Q5 1042 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 C1SP09871 688 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 NDUFAF5Q5TEU4 345 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 CBLL1Q75N03 491 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 BHLHA9Q7RTU4 235 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 RPS19BP1Q86WX3 136 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ST7LQ8TDW4 575 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 MENTQ9BUN1 341 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 C6orf106Q9H6K1 298 aaPredicted RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 RNF167Q9H6Y7 350 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF224Q9NZL3 707 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 TRAV17A0A0B4J275 112 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 A0A1W2PPC4 97 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 SEC14L2O76054 403 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ITGAMP11215 1152 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 CRYZQ08257 329 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF791Q3KP31 576 aaPredicted RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 COX20Q5RI15 118 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 METTL2BQ6P1Q9 378 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 Q6ZNX1 250 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ENPP4Q9Y6X5 453 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 AGFG2O95081 481 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 YES1P07947 543 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 IFNGR1P15260 489 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 OR1D4P47884 311 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 POU3F4P49335 361 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 OR1D5P58170 312 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 SNRPD2P62316 118 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 SOWAHCQ53LP3 525 aaPredicted RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 AFMIDQ63HM1 303 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 NEIL3Q8TAT5 605 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 FAM46AQ96IP4 442 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 MFRPQ9BY79 579 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 CNIH4Q9P003 139 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 PPT2Q9UMR5 302 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 NOSIPQ9Y314 301 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 AGAP5A6NIR3 686 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 FAAHO00519 579 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 DLGAP1O14490 977 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 SMAD9O15198 467 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ENTPD6O75354 484 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 IL3RAP26951 378 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 PRLHRP49683 370 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 HLA-BQ31612 363 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 BCDIN3DQ7Z5W3 292 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF709Q8N972 641 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 PDLIM5Q96HC4 596 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 SECISBP2Q96T21 854 aaKnown RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 METTL12A8MUP2 240 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 UGT2B7P16662 529 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 PRPS1P60891 318 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 SLC5A12Q1EHB4 618 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 OLIG3Q7RTU3 272 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 KLBQ86Z14 1044 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 RSC1A1Q92681 617 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 NECAB3Q96P71 396 aaPredicted RBP10.17□□□□□ -0.78
CLCN6-202ENST00000346436 MED18Q9BUE0 208 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF442Q9H7R0 627 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 SLC7A7Q9UM01 511 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 CARD8Q9Y2G2 431 aa10.17□□□□□ -0.78
CLCN6-202ENST00000346436 ASPDHA6ND91 283 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 IDSB3KWA1 339 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 SLC9A3P48764 834 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 AKIRIN2Q53H80 203 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 SLC18B1Q6NT16 456 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 SSX6Q7RTT6 188 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 Q8N402 240 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 PARP16Q8N5Y8 322 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 OR4K5Q8NGD3 323 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM185BQ9H7F4 350 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 PROCRQ9UNN8 238 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.16□□□□□ -0.78
CLCN6-202ENST00000346436 PCDHGA5Q9Y5G8 931 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 NUMA1Q14980 2115 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 PEX11BO96011 259 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 HLA-DPB1P04440 258 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 CDK1P06493 297 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 GLB1P16278 677 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 PSMB5P28074 263 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 PCGF2P35227 344 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 NKAPLQ5M9Q1 402 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 SLX4IPQ5VYV7 408 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 SLC27A4Q6P1M0 643 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 TSSK4Q6SA08 328 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 OR8J1Q8NGP2 316 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 ZDHHC16Q969W1 377 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 CENPOQ9BU64 300 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 PAPOLGQ9BWT3 736 aaKnown RBP10.16□□□□□ -0.78
CLCN6-202ENST00000346436 EXTL2Q9UBQ6 330 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 DOCK1Q14185 1865 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 TEX13DA0A0J9YY54 714 aaPredicted RBP10.16□□□□□ -0.78
CLCN6-202ENST00000346436 A0A1W2PQL4 384 aaPredicted RBP10.16□□□□□ -0.78
CLCN6-202ENST00000346436 NOTOA8MTQ0 251 aa10.16□□□□□ -0.78
CLCN6-202ENST00000346436 EIF1BO60739 113 aaKnown RBP10.16□□□□□ -0.78
CLCN6-202ENST00000346436 CERS1P27544 350 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms