RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 AK6Q9Y3D8 172 aaKnown RBP18.24■□□□□ 0.51
HDAC4-201ENST00000345617 PHLPP1O60346 1717 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 MDC1Q14676 2089 aaKnown RBP18.24■□□□□ 0.51
HDAC4-201ENST00000345617 UBE2NP61088 152 aaKnown RBP18.24■□□□□ 0.51
HDAC4-201ENST00000345617 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 SAP130Q9H0E3 1048 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 IL20RAQ9UHF4 553 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 EPHA1P21709 976 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 INHBCP55103 352 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 CLDN6P56747 220 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 ACSM3Q53FZ2 586 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 YIF1BQ5BJH7 314 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF574Q6ZN55 896 aaPredicted RBP18.24■□□□□ 0.51
HDAC4-201ENST00000345617 LARP4Q71RC2 724 aaKnown RBP eCLIP18.24■□□□□ 0.51
HDAC4-201ENST00000345617 CPOQ8IVL8 374 aa18.24■□□□□ 0.51
HDAC4-201ENST00000345617 DUX1O43812 170 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 PEX10O60683 326 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 RAB5AP20339 215 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 NR0B1P51843 470 aaKnown RBP18.23■□□□□ 0.51
HDAC4-201ENST00000345617 CYP27C1Q4G0S4 372 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 NKAIN3Q8N8D7 197 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 KATNB1Q9BVA0 655 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 NMNAT1Q9HAN9 279 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-201ENST00000345617 A0A087WZY1 265 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 LAP3P28838 519 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 HMGCLP35914 325 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 RPS26P62854 115 aaKnown RBP18.23■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF322Q6U7Q0 402 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-201ENST00000345617 POMT1Q9Y6A1 747 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 TUBAL3A6NHL2 446 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 WASP42768 502 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 RAET1LQ5VY80 246 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 CDRT4Q8N9R6 151 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 IKZF4Q9H2S9 585 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 OPA3Q9H6K4 179 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 C12orf10Q9HB07 376 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 CASP3P42574 277 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 SLC22A6Q4U2R8 563 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 C3orf38Q5JPI3 329 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF705AQ6ZN79 300 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-201ENST00000345617 NDUFAF7Q7L592 441 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF610Q8N9Z0 462 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 SCML1Q9UN30 329 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 SNCAP37840 140 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 RAB28P51157 221 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 LTBQ06643 244 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 PRAMEF8Q5VWM4 474 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 PRAMEF7Q5VXH5 474 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 HERPUD2Q9BSE4 406 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 HINT2Q9BX68 163 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 DEFB126Q9BYW3 111 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 ACPPP15309 386 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 VPS25Q9BRG1 176 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 HRASLS2Q9NWW9 162 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 SURF4O15260 269 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 CALCRP30988 508 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 TXNRD3NBQ6F5E7 133 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 PTCHD1Q96NR3 888 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 NSUN5Q96P11 429 aaKnown RBP18.23■□□□□ 0.51
HDAC4-201ENST00000345617 ST6GALNAC5Q9BVH7 336 aa18.23■□□□□ 0.51
HDAC4-201ENST00000345617 PHIPQ8WWQ0 1821 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 ADRB1P08588 477 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 SPP1P10451 314 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 CASP6P55212 293 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF780AO75290 641 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 RNF212Q495C1 297 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 A0A0G2JLL6 359 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 MYOCOSA0A1B0GUC4 107 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 CYTIPO60759 359 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 PMS2P2O95744 297 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 APOA2P02652 100 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 CD276Q5ZPR3 534 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 PRRT2Q7Z6L0 340 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 B3GNT8Q7Z7M8 397 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 PTHP01270 115 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF133P52736 654 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 LANCL3Q6ZV70 420 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 FBRSL1Q9HCM7 1045 aaKnown RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 SIDT1Q9NXL6 827 aaKnown RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 Q9Y3F1 56 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 MCM3APO60318 1980 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 MROH6A6NGR9 719 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 ACVRL1P37023 503 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 RNF4P78317 190 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 LDB2O43679 373 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 SMPD1P17405 629 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 PSMB3P49720 205 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 SLC10A1Q14973 349 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 TCTE1Q5JU00 501 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 HENMT1Q5T8I9 393 aaKnown RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 CARD17Q5XLA6 110 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 NKX3-1Q99801 234 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 TXLNGYQ9BZA5 131 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 KLHL42Q9P2K6 505 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 GPR160Q9UJ42 338 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 CXADRP78310 365 aa18.22■□□□□ 0.51
HDAC4-201ENST00000345617 MRPS34P82930 218 aaKnown RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 EXOSC6Q5RKV6 272 aaKnown RBP18.22■□□□□ 0.51
HDAC4-201ENST00000345617 TDRD15B5MCY1 1934 aaKnown RBP18.21■□□□□ 0.51
HDAC4-201ENST00000345617 B3GALNT1O75752 331 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms