RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ATAD5Q96QE3 1844 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 PRAMEF25A6NGN4 478 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 PLPP1O14494 284 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 SLC6A12P48065 614 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 NEDD4LQ96PU5 975 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 STACQ99469 402 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 GPR83Q9NYM4 423 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 USP36Q9P275 1121 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 ARFGEF1Q9Y6D6 1849 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 IGHV1OR21-1A0A087WYE8 117 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 RAD51DO75771 328 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 STARD6P59095 220 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 BLMHQ13867 455 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 TMEM207Q6UWW9 146 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 Q6ZSR9 355 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 EIF2B2P49770 351 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 RAB2AP61019 212 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 LTB4RQ15722 352 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 PRAMEF17Q5VTA0 474 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 LAS2Q8IYD9 372 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 OR2T11Q8NH01 316 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 CNIH3Q8TBE1 160 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 NEURL3Q96EH8 262 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 ALG14Q96F25 216 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF891A8MT65 544 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 NRG2O14511 850 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 SUSD5O60279 629 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 EIF1BO60739 113 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 DNAJB5O75953 348 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 LCATP04180 440 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 CELA2BP08218 269 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF12P17014 697 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 FUT4P22083 530 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 GRPRP30550 384 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 FAM53BQ14153 422 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 THOC7Q6I9Y2 204 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 LHFPL3Q86UP9 236 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 MS4A15Q8N5U1 240 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 MORN4Q8NDC4 146 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 BMP2P12643 396 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 MESP2Q0VG99 397 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 PDE7AQ13946 482 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 EIF2B1Q14232 305 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 MRPL21Q7Z2W9 205 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 WDR5BQ86VZ2 330 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 OR5L1Q8NGL2 311 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 OR8K3Q8NH51 312 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 SLC7A6OSQ96CW6 309 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 MALT1Q9UDY8 824 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 PCDHGA6Q9Y5G7 932 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 C2orf72A6NCS6 295 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 PCDH17O14917 1159 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 TRIM63Q969Q1 353 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 ELP4Q96EB1 424 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 C16orf58Q96GQ5 468 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 OR51B6Q9H340 312 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 FN3KQ9H479 309 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF639Q9UID6 485 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 NDUFA5Q16718 116 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 FNDC8Q8TC99 324 aa15.24■□□□□ 0.03
SMARCA4-201ENST00000344626 PRAMEF10O60809 474 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 WDPCPO95876 746 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 PEX11BO96011 259 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF35P13682 527 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 FKBP2P26885 142 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 RPS5P46782 204 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 TPTEP56180 551 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 SLC2A12Q8TD20 617 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 CPPED1Q9BRF8 314 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 KLF13Q9Y2Y9 288 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 PCDHGA8Q9Y5G5 932 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 A0A1W2PQF6 199 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 FRKP42685 505 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 ULBP2Q9BZM5 246 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 DYNLRB1Q9NP97 96 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 HERV-K104P61576 105 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 UGT8Q16880 541 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 RNF220Q5VTB9 566 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 CPEB2Q7Z5Q1 589 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 SLC35F2Q8IXU6 374 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 OLIG1Q8TAK6 271 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 HOXB9P17482 250 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 CDH15P55291 814 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 HOXC5Q00444 222 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 MADCAM1Q13477 382 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 KCTD21Q4G0X4 260 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 MFSD12Q6NUT3 480 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF782Q6ZMW2 699 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF704Q6ZNC4 412 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 HCAR1Q9BXC0 346 aa15.23■□□□□ 0.03
SMARCA4-201ENST00000344626 ORC5O43913 435 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 SPIN3Q5JUX0 258 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 FAM205BPQ63HN1 556 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 CEACAM19Q7Z692 300 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 OR9Q2Q8NGE9 314 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 TSLPQ969D9 159 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 A4GALTQ9NPC4 353 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 FAM53CQ9NYF3 392 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 AHCYL1O43865 530 aa15.22■□□□□ 0.03
SMARCA4-201ENST00000344626 MT-ND2P03891 347 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms