RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TAS2R10Q9NYW0 307 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 PLCL2Q9UPR0 1127 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 HTTP42858 3142 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ABHD14A-ACY1A0A1B0GW23 586 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 HIST1H2ABP04908 130 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 MAT2AP31153 395 aaKnown RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 HIST3H2AQ7L7L0 130 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 TPRA1Q86W33 373 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 CBLN2Q8IUK8 224 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 HAVCR2Q8TDQ0 301 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 SMPDL3BQ92485 455 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 HIST1H2ACQ93077 130 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ZMYND19Q96E35 227 aaPredicted RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 PGLYRP3Q96LB9 341 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 MFFQ9GZY8 342 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 A0A087WV48 116 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 A0A1B0GUH1 482 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 B3GALNT1O75752 331 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 KRT33AO76009 404 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 POP4O95707 220 aaKnown RBP13.78□□□□□ -0.2
CLCN1-201ENST00000343257 WDPCPO95876 746 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 ATP1B1P05026 303 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 VSIG10L2P0DP72 767 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 IFNGR1P15260 489 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 TEAD1P28347 426 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 STAT5AP42229 794 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SSR2P43308 183 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 KHKP50053 298 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 GDI2P50395 445 aaKnown RBP13.78□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF85Q03923 595 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 DYRK1AQ13627 763 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 LRRC37A5PQ49AS3 106 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 HACD4Q5VWC8 232 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 THSD4Q6ZMP0 1018 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SUN3Q8TAQ9 357 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 FANK1Q8TC84 345 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 THEM6Q8WUY1 208 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 COL26A1Q96A83 441 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 OTUB2Q96DC9 234 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
CLCN1-201ENST00000343257 TEAD3Q99594 435 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 ANKRD19PQ9H560 264 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SYNDIG1Q9H7V2 258 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 MOKQ9UQ07 419 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 YIPF1Q9Y548 306 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 TRAV27A0A087WT01 109 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 F12P00748 615 aaPredicted RBP13.78□□□□□ -0.2
CLCN1-201ENST00000343257 HMGN1P05114 100 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 GALTP07902 379 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 CKBP12277 381 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 MST1P26927 711 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 MAOBP27338 520 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 GRPRP30550 384 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 RAG2P55895 527 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SHC2P98077 582 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 TGM3Q08188 693 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 CDH26Q8IXH8 852 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 PXT1Q8NFP0 134 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 ACOT11Q8WXI4 607 aaPredicted RBP13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SCLYQ96I15 445 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SGPP1Q9BX95 441 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SYNPO2LQ9H987 977 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
CLCN1-201ENST00000343257 LHX9Q9NQ69 397 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
CLCN1-201ENST00000343257 OR2M5A3KFT3 312 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 IDSB3KWA1 339 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 PLPP2O43688 288 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 STX11O75558 287 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 RECQLP46063 649 aaPredicted RBP13.77□□□□□ -0.2
CLCN1-201ENST00000343257 CAMK1Q14012 370 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.2
CLCN1-201ENST00000343257 TMEM150AQ86TG1 271 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 CMIPQ8IY22 773 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 TMEM185AQ8NFB2 350 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 TNFAIP8L1Q8WVP5 186 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF559Q9BR84 538 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 POLMQ9NP87 494 aaPredicted RBP13.77□□□□□ -0.2
CLCN1-201ENST00000343257 LRFN2Q9ULH4 789 aa13.77□□□□□ -0.2
CLCN1-201ENST00000343257 KIF26AQ9ULI4 1882 aaPredicted RBP13.77□□□□□ -0.2
CLCN1-201ENST00000343257 CACNA1CQ13936 2221 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 J3QRE1 110 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 GREM1O60565 184 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 TMIGD3P0DMS9 266 aaPredicted RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 SAGP10523 405 aaPredicted RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 BMP7P18075 431 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 MAKP20794 623 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 FPR3P25089 353 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 STARP49675 285 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 PRLHRP49683 370 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 YOD1Q5VVQ6 348 aaPredicted RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 HSD17B13Q7Z5P4 300 aaPredicted RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 OR52L1Q8NGH7 329 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 OR13C2Q8NGS9 318 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 FCAMRQ8WWV6 532 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 PAWRQ96IZ0 340 aaKnown RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 PINK1Q9BXM7 581 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 GPN1Q9HCN4 374 aaPredicted RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 KLHL9Q9P2J3 617 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 PRAF2O60831 178 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms