RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SURF4O15260 269 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 NIPSNAP2O75323 286 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ZIC2O95409 532 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 SNAPC2Q13487 334 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 BAATQ14032 418 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 COL5A1-AS1Q5SY13 56 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ANKLE1Q8NAG6 615 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 FIBINQ8TAL6 211 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ZNF514Q96K75 400 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 ATXN7L1Q9ULK2 861 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 DOT1LQ8TEK3 1739 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ENPP3O14638 875 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TBX19O60806 448 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CNMDO75829 334 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 H2BFMP0C1H6 154 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SFTA3P0C7M3 94 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SULT1A3P0DMM9 295 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SULT1A4P0DMN0 295 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR1E2P47887 323 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 PREPP48147 710 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 FCGRTP55899 365 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MRPS6P82932 125 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 HMGCS1Q01581 520 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TMPPEQ6ZT21 453 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR10Q1Q8NGQ4 319 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 LILRB1Q8NHL6 650 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 BRI3BPQ8WY22 251 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CDS1Q92903 461 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MRPL13Q9BYD1 178 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 C1orf198Q9H425 327 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 GSX1Q9H4S2 264 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 ZCCHC3Q9NUD5 404 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 RIMBP3CA6NJZ7 1639 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 RIMBP3BA6NNM3 1639 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 RIMBP3Q9UFD9 1639 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 A0A1W2PQ67 120 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MPPED1O15442 326 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CRHP06850 196 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 UBL4AP11441 157 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 PSMB1P20618 241 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR4A47Q6IF82 309 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 NIPA1Q7RTP0 329 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 GOLGA7Q7Z5G4 137 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MAP4K3Q8IVH8 894 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CDH26Q8IXH8 852 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CADM3Q8N126 398 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 DNERQ8NFT8 737 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR4A4PQ8NGN8 299 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 DVL3Q92997 716 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 DGAT2Q96PD7 388 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 HERPUD2Q9BSE4 406 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SOX7Q9BT81 388 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ENKD1Q9H0I2 346 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ZNF552Q9H707 407 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 RHOFQ9HBH0 211 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 LIPT1Q9Y234 373 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ADAMTS13Q76LX8 1427 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 NLRC5Q86WI3 1866 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 A0A087WUU8 490 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR6C75A6NL08 312 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TMEM233B4DJY2 109 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OPN1SWP03999 348 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 H2AFB1P0C5Y9 115 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MMP11P24347 488 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 NAA10P41227 235 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 DHPSP49366 369 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 TMEM244Q5VVB8 128 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 HGSNATQ68CP4 663 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MEX3BQ6ZN04 569 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 Q6ZNX1 250 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TMEM156Q8N614 296 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR5D14Q8NGL3 314 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 KCNA7Q96RP8 456 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TRMT61BQ9BVS5 477 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 PORCNQ9H237 461 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 KCNQ5Q9NR82 932 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ZDHHC3Q9NYG2 299 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 PIK3C2BO00750 1634 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 PI15O43692 258 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 PNMTP11086 282 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 G6PDP11413 515 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 GP1BBP13224 206 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CYP2B6P20813 491 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ARNTP27540 789 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 LTKP29376 864 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SOX2P48431 317 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MRPS5P82675 430 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 MLLT11Q13015 90 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 MPEG1Q2M385 716 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 PLEKHH3Q7Z736 793 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CPXM2Q8N436 756 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 DNAJC5GQ8N7S2 189 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CMTM2Q8TAZ6 248 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TANKQ92844 425 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 HHIPL1Q96JK4 782 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR10C1Q96KK4 312 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 NFASCO94856 1347 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MAGI3Q5TCQ9 1506 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ALS2Q96Q42 1657 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 MEIS3P1A6NDR6 274 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms