RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 A8MT66 165 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 HPNP05981 417 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SPATA31C1P0DKV0 1188 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 UQCRFS1P47985 274 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SLC45A3Q96JT2 553 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 TMEM43Q9BTV4 400 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SMIM3Q9BZL3 60 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SCGB1A1P11684 91 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 CPEB3Q8NE35 698 aaKnown RBP16.64■□□□□ 0.25
SMAD4-201ENST00000342988 HHIPL1Q96JK4 782 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 C1orf198Q9H425 327 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 WIF1Q9Y5W5 379 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 CTXN1P60606 82 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 MICAQ29983 383 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 OR52E8Q6IFG1 317 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 CISD2Q8N5K1 135 aaKnown RBP16.64■□□□□ 0.25
SMAD4-201ENST00000342988 THAP3Q8WTV1 239 aaPredicted RBP16.64■□□□□ 0.25
SMAD4-201ENST00000342988 MTCH1Q9NZJ7 389 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 OR14J1Q9UGF5 321 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 KIAA1217Q5T5P2 1943 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 EVA1AQ9H8M9 152 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 PIGVQ9NUD9 493 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SORBS2O94875 1100 aaKnown RBP16.64■□□□□ 0.25
SMAD4-201ENST00000342988 EIF4HQ15056 248 aaKnown RBP16.64■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF597Q96LX8 424 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 TMEM235A6NFC5 223 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 J3KR12 359 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 PRICKLE2Q7Z3G6 844 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 FOXJ1Q92949 421 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 EMC7Q9NPA0 242 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 COPS3Q9UNS2 423 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 PRKACGP22612 351 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SERTAD2Q14140 314 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SLC35G3Q8N808 338 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 KREMEN2Q8NCW0 462 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 MYEF2Q9P2K5 600 aaKnown RBP16.64■□□□□ 0.25
SMAD4-201ENST00000342988 SLC7A7Q9UM01 511 aa16.64■□□□□ 0.25
SMAD4-201ENST00000342988 MCRIP1C9JLW8 97 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 FBXO24O75426 580 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 GABREP78334 506 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 SLC35F3Q8IY50 421 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF321PQ8N8H1 164 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 CD200R1Q8TD46 325 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 C4orf47A7E2U8 309 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 TLCD1Q96CP7 247 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 PWWP2AQ96N64 755 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 PRR36Q9H6K5 1346 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 A0A0U1RQJ8 604 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 NKX6-3A6NJ46 265 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 LOC730098B7Z3J9 87 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 PTNP21246 168 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 VGLL4Q14135 290 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 RDH14Q9HBH5 336 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 NCOA3Q9Y6Q9 1424 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 DBHP09172 617 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 NANOGP8Q6NSW7 305 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 ALG3Q92685 438 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 NANOGQ9H9S0 305 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 ZBTB20Q9HC78 741 aaPredicted RBP16.63■□□□□ 0.25
SMAD4-201ENST00000342988 RNF19AQ9NV58 838 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 ATXN7L1Q9ULK2 861 aaPredicted RBP16.63■□□□□ 0.25
SMAD4-201ENST00000342988 SLC35A3Q9Y2D2 325 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 LOC285095A0A1B0GVY8 99 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 TTC24A2A3L6 582 aaPredicted RBP16.63■□□□□ 0.25
SMAD4-201ENST00000342988 HLA-DQB2P05538 268 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 OTX2P32243 289 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 EIF2DP41214 584 aaKnown RBP16.63■□□□□ 0.25
SMAD4-201ENST00000342988 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.63■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF684Q5T5D7 378 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 PLBD1Q6P4A8 553 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 CPXM2Q8N436 756 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 NUDT19A8MXV4 375 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 LILRA4P59901 499 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 POU4F3Q15319 338 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 GLYR1Q49A26 553 aaPredicted RBP16.63■□□□□ 0.25
SMAD4-201ENST00000342988 SPANXN4Q5MJ08 99 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 SLC35D2Q76EJ3 337 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 COQ3Q9NZJ6 369 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 LCN6P62502 163 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF852Q6ZMS4 543 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 OTOP2Q7RTS6 562 aa16.63■□□□□ 0.25
SMAD4-201ENST00000342988 MTHFD2LQ9H903 347 aaPredicted RBP16.63■□□□□ 0.25
SMAD4-201ENST00000342988 CCL22O00626 93 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 DPP4P27487 766 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 TAGLNQ01995 201 aaKnown RBP16.62■□□□□ 0.25
SMAD4-201ENST00000342988 TIGITQ495A1 244 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 TEX261Q6UWH6 196 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 GATSQ8NAP1 163 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 SCLYQ96I15 445 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 C10orf90Q96M02 699 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 OR7D2Q96RA2 312 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 U3KQ87 197 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 FAM24AA6NFZ4 105 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 SEC14L5O43304 696 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 XRCC3O43542 346 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 CALCRP30988 508 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 CPNE8Q86YQ8 564 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms