RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 DYNC2LI1Q8TCX1 351 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 BPIFA2Q96DR5 249 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SMCO4Q9NRQ5 59 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 WIF1Q9Y5W5 379 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 DCDC2BA2VCK2 349 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SIGLEC6O43699 453 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 S1PR1P21453 382 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 UBA1P22314 1058 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TLE4Q04727 773 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TMIGD1Q6UXZ0 262 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CYP4Z1Q86W10 505 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PDZD9Q8IXQ8 264 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 LINC00469Q8N7U9 141 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 EDAQ92838 391 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ITPAQ9BY32 194 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 H7C4K7 107 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 C21orf33P30042 268 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GEMP55040 296 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 RGS1Q08116 209 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MFSD13AQ14CX5 517 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF783Q6ZMS7 281 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR5M1Q8NGP8 315 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 HMCESQ96FZ2 354 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ORAI3Q9BRQ5 295 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 AGAP14A8MT82 685 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SPRY1O43609 319 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 KLK1P06870 262 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 IL3P08700 152 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CD80P33681 288 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 INCA1Q0VD86 236 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 C19orf48Q6RUI8 117 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MRPL41Q8IXM3 137 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PCDHB1Q9Y5F3 818 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TNS1Q9HBL0 1735 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 A6NLC8 198 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TNFRSF11BO00300 401 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ACKR2O00590 384 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CCR6P51684 374 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CCR9P51686 369 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MICBQ29980 383 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GHITMQ9H3K2 345 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 HRH4Q9H3N8 390 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 LYRM2Q9NU23 88 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 WDR45Q9Y484 360 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NME7Q9Y5B8 376 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF749O43361 778 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 RNF13O43567 381 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ADAM23O75077 832 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF821O75541 412 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GSK3AP49840 483 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ISL1P61371 349 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CADM3Q8N126 398 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MZB1Q8WU39 189 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR52E6Q96RD3 313 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GNG13Q9P2W3 67 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MBD1Q9UIS9 605 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PCSK5Q92824 1860 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TMEM129A0AVI4 362 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR13C7P0DN81 318 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SORDQ00796 357 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PRB3Q04118 309 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SHISA6Q6ZSJ9 500 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 YIPF7Q8N8F6 280 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 KIAA1191Q96A73 305 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FAM71F1Q96KD3 344 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF302Q9NR11 478 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 DFFBO76075 338 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 S100A3P33764 101 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SHMT1P34896 483 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 EVX1P49640 407 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FOXO1Q12778 655 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GRIN2CQ14957 1233 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 RNASE10Q5GAN6 216 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FAM71CQ8NEG0 241 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 EXOSC8Q96B26 276 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SDSLQ96GA7 329 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NECAB3Q96P71 396 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 HCN3Q9P1Z3 774 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 KCNK2O95069 426 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 HNRNPKP61978 463 aaKnown RBP eCLIP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 HABP2Q14520 560 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GXYLT1Q4G148 440 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OVCH2Q7RTZ1 564 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CRYBG2Q8N1P7 616 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 DNAJC22Q8N4W6 341 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TMEM41AQ96HV5 264 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 RNF146Q9NTX7 359 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PCDH8O95206 1070 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PRB1P04280 392 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 UEVLDQ8IX04 471 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MBD3L1Q8WWY6 194 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FOPNLQ96NB1 174 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SLC38A2Q96QD8 506 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GNRHRP30968 328 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CDK5R2Q13319 367 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 BOP1Q14137 746 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 KDM4DQ6B0I6 523 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GPR83Q9NYM4 423 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ELF5Q9UKW6 265 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PLEKHM1Q9Y4G2 1056 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms